| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0182 |
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| Symbol | |
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| ID | 6161188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 191995 |
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| End bp | 192987 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662926 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001789222 |
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| Protein GI | 171056873 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCA GCAGCTCCCC CTTCGACGCC GAACGTGCCA TCCGGATGGC ACGCCAGACC
CTGCAGATCG AGGCCGATGC CCTGCGCGAT CTGCAGCCGC AGCAAGGCGC GTCCTTCGCC
GAGACGGTGC AGGCGATGCT CGCCTGCCAG GGCCGCGTGG TCGTGATGGG CATGGGCAAG
AGCGGCCATG TGGGCCGCAA GATCGCCGCC ACGCTGGCGT CGACCGGCAC GCCGGCGATG
TTCGTGCACC CGGGCGAGGC CAGCCACGGC GACCTCGGCA TGGTCACGCG CGGCGATGTC
GTGCTGGCGA TCTCCAACTC GGGCGAGAGC GACGAACTGG CGGCGATCCT GCCCGCGCTC
AAGCGCTTGG GCGTCACGCT GGTGGCGATG ACCGGCCGGG CCGAGTCGAC GCTGGCCTCG
CATGCCGACC TGGTGCTGTC CAACCGCGTC ACCCAGGAGG CCTGTCCGCT CAACCTCGCG
CCCACCGCCA GCACCACGGC GCAGCTGGCG CTCGGTGACG CGCTGGCGGT GGCGCTGCTC
GATGCGCGCG GCTTCCGGGC CGAGGACTTC GCCCGCTCGC ACCCGGGCGG CTCGCTGGGC
CGCAAGCTGC TGACCCATGT GCGCGACATC ATGCGCAGCG GCGACGCGGT GCCGCGTGTG
CGCCCCGACA CCGGCTTCCT CGACGTCATG CGCGAGATGA GCGCCAAGGG CCTGGGCACG
ACGGCCGTGG TCGACGAAGA CGGCCGCGCG ATCGGCATCT TCACCGACGG CGATCTGCGC
CGCGCCATCG AGGCTGGCAT CGACCTGCGC GAGCGCGATG CCCGCGGCGT GATGCATGCC
GGCGCGCGCA CCGTGCGCGA GGACGCCCTG GCGGTCGAGG CGGCCGGCCT GATGGAAGAG
GCCCGTGTCA CGACCTTGCT GGTGAGCGAC GCGCAGGGCC TGCTGGTGGG CGCGATCAAC
ACCAACGACC TGATGCGCGC CAAGGTGATC TGA
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| Protein sequence | MSASSSPFDA ERAIRMARQT LQIEADALRD LQPQQGASFA ETVQAMLACQ GRVVVMGMGK
SGHVGRKIAA TLASTGTPAM FVHPGEASHG DLGMVTRGDV VLAISNSGES DELAAILPAL
KRLGVTLVAM TGRAESTLAS HADLVLSNRV TQEACPLNLA PTASTTAQLA LGDALAVALL
DARGFRAEDF ARSHPGGSLG RKLLTHVRDI MRSGDAVPRV RPDTGFLDVM REMSAKGLGT
TAVVDEDGRA IGIFTDGDLR RAIEAGIDLR ERDARGVMHA GARTVREDAL AVEAAGLMEE
ARVTTLLVSD AQGLLVGAIN TNDLMRAKVI
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