Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0180 |
Symbol | |
ID | 6161186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 189530 |
End bp | 189931 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641662924 |
Product | transcriptional coactivator/pterin dehydratase |
Protein accession | YP_001789220 |
Protein GI | 171056871 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2154] Pterin-4a-carbinolamine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCCA GCCCTGCCGT GCTGAGCGAG GAGCAGTTGC GCAGCCGGCT GCCGCTCGAG CTGCCGCACT GGTCGATCGA ACACGGCCGG CTGTTCCGCC GCTGGCGCAC CAGCGGCTGG AAGAGCACGC TGATGGTGGT CAATGCCATC GGTCATCTCG CCGAGGCGGC CTGGCACCAC CCCGATCTGT CGGTGTCGTA TGCGGCGGTC GACGTCAAGC TGAGCACCCA CTCGGCCGGC GGCATCACCG AGAAGGATCT GGCGCTGGCC AGCAAGATCG AGCAGGTGAT CGGCTGGCAG CCGGCGCTGG AGCCCGACTC TGTGCTCGAG GGCACGCCCA ACAGCGACCC GCGGCTGCGC TACATCCGGT ACGACACGCC GGCGCCGGGT GGCACGGACT GA
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Protein sequence | MNPSPAVLSE EQLRSRLPLE LPHWSIEHGR LFRRWRTSGW KSTLMVVNAI GHLAEAAWHH PDLSVSYAAV DVKLSTHSAG GITEKDLALA SKIEQVIGWQ PALEPDSVLE GTPNSDPRLR YIRYDTPAPG GTD
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