| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0178 |
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| Symbol | |
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| ID | 6160759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 185723 |
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| End bp | 188257 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641662922 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001789218 |
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| Protein GI | 171056869 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC TCGTCATCGG CCACGGCATG GTCGGGCACA AGTTCCTGGA GAGCCTGGAC
GCCTCGGGTC TGCGCGACGC GCGGGTCACC GTCCTGTGCG AGGAGCCGCG CCCGGCCTAC
GACCGCGTGC ACCTGTCGGA GTTCTTCTCC GGCAAGGCCG CCGAGGACCT GTCGCTGGTG
GCGCCGGGTT TCTTCGAGCG CGACAACGTG CTGCTGCGCC TGAACACCCG CGCCGTGGCG
ATCGACCGCG CCGGCAAGAC CGTCACCACC GCCGCCGGCG AGGTGCTGGC CTACGACAAG
CTGGTGATCG CGACCGGCTC CTACCCCTTC GTGCCGCCGC TGCCGGGCAA GGACCGCACC
GACTGCTTCG TCTACCGCAC CATCGAGGAC CTGGAGGGCA TGCTCGAATG CGGCAGCCGC
TCCAAGAGCG GCGTCGTCAT CGGCGGCGGG CTGCTGGGCC TGGAATGCGC CAAGGCGCTG
CGCGACATGA AGCTGCAGAC CCACGTGGTC GAGTTCTCGC CGCACCTGAT GGCGCTGCAG
GTCGACGAGG CCGGTGGCCG CACGCTGCGC GCCAAGATCG AGAAACTCGG CGTGGGCGTG
CACACGCAGA AGAACACGGT CGAGATCGTC GACGGCGAAA CCGCCCGCCA CCGCATGGTG
TTCGCCGACG GCAGCCAGCT CGAGACCGAC ATGATCGTGT TCTCGGCCGG CATCCGTCCG
CGTGACGAGA TCGCGCGCCA GTGCGGCCTC GAGGTCGGCC CGCGCGGCGG CATCGTGATC
GACAACCGCT GCCGCACCAG CGACGCCGAC ATCTACGCGA TCGGCGAGTG CGCGCTCTGG
AACGGCCAGA TCTTCGGCCT GGTGGCGCCG GGCTACGAGA TGGCCCGTGT CGCCGCGCGG
CAGCTGGCCG GCGAGGCGGC GGCCGAGTTC GGCGGCGCCG ACATGAGCAC CAAGCTCAAG
CTGATGGGCG TGGACGTGGC GAGCATCGGC GACGCCATGG GCAAGACGCC CGGCAGCCGC
GCCTACCAGT TCAACGACGA GCGCAAGCAG GTCTACAAGA AGCTGGTGGT GTCCGAGTGC
GGCAAGCACC TGCTGGGCGC CGTGCTGGTG GGCGACGCGG CCGAATACGG CACGCTGCTG
CAGATGGCGC TCAACCGCAT CGAACTGCCC GAGGCGCCCG AATTCCTGAT CCTGCCGAGC
AGCGACGGCC AGGCCAGGCC CGCACTGGGC GTCGACGCGC TGCCGGACTC GGCGCAGATC
TGCTCGTGCA ACAACGTCAG CAAGGGCCAG TTGTGCGCGG CGGTGGCCGG CGGCGCCAGC
ACCATCGGCG AACTCAAGGC CTGCACCCAG GCCGGCACCG CCTGCGGCGG CTGCGTGCCG
CTGGTGACGC AGGTCATGAA GGCCGAGATG AAGAAGCAGG GCCTGGCGGT CAACAACCAC
CTGTGCGAGC ACTTCGCCTA CTCGCGCCAG GAGCTGTTCC ACATCATCAA GGTCGAGGGC
ATCCGCAGCT TCGACGAACT GCTGCGCCGC CACGGCAAAG GCCTGGGCTG CGATGTCTGC
AAGCCGGTGG CGGCCTCGAT CCTGGCCTCG GTCTGGAACG ACTTCATCCT GAAGAAGGAA
CTGGCCGGCC TGCAGGACTC GAACGACTAC TTCCTGGGCA ACATCCAGAA GGACGGCACC
TACTCGGTGG TGCCGCGCAT GGCCGGCGGC GAGGTCACGC CCGACGGCCT GATCGCGGTC
GGCCAGGTGG CCAAGAAGTA CGGCCTGTAC ACCAAGATCA CCGGCGGCCA GCGGGTCGAC
CTGTTCGGCG CCCGCGTCGA TCAGCTGCCG TCGATCTGGG AGGAACTGAT CGCCGCAGGC
TTCGAGTCGG GCCATGCGTA CGGCAAGTCG CTGCGCACGG TCAAGAGCTG CGTCGGCTCG
ACCTGGTGCC GCTACGGCGT GGCCGACAGC GTGGGCCTGG CGATCGAGCT GGAGAACCGC
TACAAGGGCC TGCGCGCACC GCACAAGATC AAGTTCGGCG TCTCGGGCTG CACCCGCGAA
TGCGCCGAGG CGCAGGGCAA GGACGTCGGC GTGATCGCCA CCGAGAAGGG CTGGAACCTG
TACGTGTGCG GCAACGGCGG CATGAAGCCG CGCCATGCCG AGCTGCTGGC CTCGGACCTG
TCGAAGCAGG AGCTGATCCG CTACATCGAC CGCTTCCTGA TGTTCTACAT CCGCACCGCC
GACCGCCTGC AGCGCACCAG CGTCTGGCGC GACAACCTCG AAGGTGGCCT CGACTACCTC
AAGCAGGTCG TCCTGCACGA CAAGCTGGGC CTGGCGGCCG AACTCGAGGC CGACATGCAG
AACGTGGTCG ACACCTACGT GTGCGAGTGG AAGAACGCGG TCACCCACCC CGAGACGCGC
AAGCGCTTCC GCCAGTTCGT CAACAGCGAC CGCACCGACC CGAACGTCAT CTTCATCCAG
GAGCGCGGCC AGATCCGCCC CGCCACGCCC GACGAGCGCG AGGCCCGCGC GGCCGATGCC
GAACTGACCG CCTGA
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| Protein sequence | MKILVIGHGM VGHKFLESLD ASGLRDARVT VLCEEPRPAY DRVHLSEFFS GKAAEDLSLV
APGFFERDNV LLRLNTRAVA IDRAGKTVTT AAGEVLAYDK LVIATGSYPF VPPLPGKDRT
DCFVYRTIED LEGMLECGSR SKSGVVIGGG LLGLECAKAL RDMKLQTHVV EFSPHLMALQ
VDEAGGRTLR AKIEKLGVGV HTQKNTVEIV DGETARHRMV FADGSQLETD MIVFSAGIRP
RDEIARQCGL EVGPRGGIVI DNRCRTSDAD IYAIGECALW NGQIFGLVAP GYEMARVAAR
QLAGEAAAEF GGADMSTKLK LMGVDVASIG DAMGKTPGSR AYQFNDERKQ VYKKLVVSEC
GKHLLGAVLV GDAAEYGTLL QMALNRIELP EAPEFLILPS SDGQARPALG VDALPDSAQI
CSCNNVSKGQ LCAAVAGGAS TIGELKACTQ AGTACGGCVP LVTQVMKAEM KKQGLAVNNH
LCEHFAYSRQ ELFHIIKVEG IRSFDELLRR HGKGLGCDVC KPVAASILAS VWNDFILKKE
LAGLQDSNDY FLGNIQKDGT YSVVPRMAGG EVTPDGLIAV GQVAKKYGLY TKITGGQRVD
LFGARVDQLP SIWEELIAAG FESGHAYGKS LRTVKSCVGS TWCRYGVADS VGLAIELENR
YKGLRAPHKI KFGVSGCTRE CAEAQGKDVG VIATEKGWNL YVCGNGGMKP RHAELLASDL
SKQELIRYID RFLMFYIRTA DRLQRTSVWR DNLEGGLDYL KQVVLHDKLG LAAELEADMQ
NVVDTYVCEW KNAVTHPETR KRFRQFVNSD RTDPNVIFIQ ERGQIRPATP DEREARAADA
ELTA
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