Gene Lcho_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0175 
Symbol 
ID6160756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp181966 
End bp182871 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID641662919 
Productmethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_001789215 
Protein GI171056866 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTC GAATCATTGA CGGCAAGGCG CTGTCCAAGC AGTTGCGGGT GGGCTTTCGC 
GAGCGGGTGG CGCGGCTGGT GGAGCAGGGC GTGCAGCCCG GCCTGGCGGT GATCCTGGTC
GGCGACAGCG CGGCCTCGAA GGTCTATGTC GGCAACAAGA TCAAGGCTTG CGAGGAGTGC
GGCGTGCGCT CGCTGCACAT CGCGCTGCCG GCCGATGCGA GCGAGGCCGA GGTGCTGGCC
ACGATCGAGC GGCTCAACGC CGACGCCACC ATCCACGGCA TCCTGGTGCA GCTGCCGCTG
CCGGCGCACA TCCAGGTCGC CCGGGTGCTG GAGGCGATCT CGGTGCACAA GGACGTCGAC
GGTTTCCACC TCTACAACGT CGGCGCGCTG GTCACCGGCA ACAGCATCTT CCCGCCGTGC
ACGCCCTACG GCGTGCAGCT GCTGCTCGAC ACCACCGGCA TCGACGTGGC CGGCCAGAAC
GTGGTGGTGG TGGGTGCCAG CAACATCGTC GGCAAGCCGA TGGGCCTGAT GCTGCTGCAG
CGCGAGGCCA CCGTGACGAT CTGCCACGCC CGCACCCGCG ACCTGGGGCA GCACACCATC
CTGGCCGACA TCCTGATCGT GGCGGCCGGC AAGCCCGGCC TGATCGTGCC CGAGATGGTC
AAGCGCGGCG CGATCGTGAT CGACGTCGGC ATCAACCGGC TCGACGACGG GCGCATCGTC
GGCGACGTGT GCTTCGACGC GGTCAAGGAG AAGGCCTCCT GGATCACGCC GGTGCCCGGC
GGGGTCGGCC CGATGACGGT GACGATGCTG ATCGAGAACA CGCTGCGATC GGCCGAACGC
GCCTTCAAGG CGGTCGACAG CGACGAATTC CAGGACTGGG AGGCACCGAC CGTCAGGTCA
CCTTGA
 
Protein sequence
MAARIIDGKA LSKQLRVGFR ERVARLVEQG VQPGLAVILV GDSAASKVYV GNKIKACEEC 
GVRSLHIALP ADASEAEVLA TIERLNADAT IHGILVQLPL PAHIQVARVL EAISVHKDVD
GFHLYNVGAL VTGNSIFPPC TPYGVQLLLD TTGIDVAGQN VVVVGASNIV GKPMGLMLLQ
REATVTICHA RTRDLGQHTI LADILIVAAG KPGLIVPEMV KRGAIVIDVG INRLDDGRIV
GDVCFDAVKE KASWITPVPG GVGPMTVTML IENTLRSAER AFKAVDSDEF QDWEAPTVRS
P