Gene Lcho_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0165 
Symbol 
ID6160409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp172064 
End bp172666 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content64% 
IMG OID641662909 
ProductXRE family transcriptional regulator 
Protein accessionYP_001789205 
Protein GI171056856 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGAC ACGGCGAAGG CGCAACCGCC TCACTCGAAG AATCGGTCGG CGCAGCCATC 
AAGGAGCAGC GGCAGCGCCA CGGGCTGACC ATCGCGCAGG TGTCGGAGCA GGCCAGCATC 
AGCCGCGGCA TGCTGTCGAA GATCGAGAAC GGCCAGACCT CCGCCGGCAT GGACACGCTT 
GCGCGCATCG CGCGTGCGCT GGGGGTCTCG ATGTCGATGC TGTTCAGCAA ATACGACGTC 
ACGGCCAGCT CGGCGCAGCA CATCAAGAAG GGGATGGGCA TGGAAGTGGT GCGTCGCGGC 
ACCAAGAACG GGCACACCTA CCACCTGCTT GCCTACGATC AGGGCCCGGT GAAACTGTTC 
GAACCCTTCC TGATCACGAT GAACGACGAC TCGGAGCGCT ACCCGACCTT CCAGCACCCG 
GGCACCGAGT TCCTGTACAT GCTCGAAGGC AAGATCGAAT ACCGCTGCGG CCAGGAGACC 
TACCTGCTCG AACCCGGCGA CTCGCTGACC TTTCAGGGCG AGGTGCCGCA CGGGCCCGAG 
AAGCTGGTGA AGTACCCGAT CAAGTTCCTG TCCTTCATCG TCTATCCGCG CGCGGCGGAG 
TGA
 
Protein sequence
MNRHGEGATA SLEESVGAAI KEQRQRHGLT IAQVSEQASI SRGMLSKIEN GQTSAGMDTL 
ARIARALGVS MSMLFSKYDV TASSAQHIKK GMGMEVVRRG TKNGHTYHLL AYDQGPVKLF 
EPFLITMNDD SERYPTFQHP GTEFLYMLEG KIEYRCGQET YLLEPGDSLT FQGEVPHGPE 
KLVKYPIKFL SFIVYPRAAE