| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0117 |
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| Symbol | |
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| ID | 6161886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 120284 |
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| End bp | 121123 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641662861 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_001789157 |
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| Protein GI | 171056808 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.08621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CCCCTTCCCT GCCGCTGAGC CTCGAGTTCT TCCCGCCCAA GACGCCCGAG
GGCGTGACCA AGCTGGCGGC CGCGCGCCAG GCGCTGTATG CGCTGCAGCC GCAGTTCTGC
TCGGTGACCT ATGGCGCCGG CGGCAGCACG CAGGACGGCA CGCTGGCCAC CGTGCAGGCC
ATCCTCGACG AGGGCTGGCA GGGCGCCTCG CACTTCACCT GCATCGGCGC CACGCGCGAG
TCGGTGCGCG AGCGGCTGGC GCAGTTCAAG GCGATGGGCA TGCGCCGCAT CGTCGCGCTG
CGTGGCGACC TGCCGAGCGG CTACGGCGCG TTCGGCGAGT TCCGCTACGC CAGCGACCTG
GTGGCCTTCA TCCGCGCCGA GACCGGCGAC CACTTCCACA TCGAGGTGGC CGCCTACCCC
GAGATGCACC CGCAGGCGCG CAGCCCGCAG GCCGACCTGC AGGCCTACGC GGCCAAGGTG
CAGGCGGGGG CCGACTCGGC CATCACGCAG TTCTTCTTCA ACGCCGACGC CTACTGGCGC
TTCGTCGACG ACGCCCAGGC GCTGGGCGCG CGCATCCCGG TGGTGCCCGG CATCATGCCG
ATCACCAATT CGAGCGGGAT CATCCGCTTC GCCGACGGCA GCGGCGCCGA GATCCCGCGC
TGGATCCGCC TGCGGCTGCA GAGCTACGGC GACGACAGCG CCAGCATCAA GGCCTTCGGC
CTCGACGTGG TCACCGACCT GTGCGAGCGC CTGCGTGCCG GCGGCGTGCC GGCCTTGCAC
TTCTACACGA TGAACAGCAG TGCGGCGGTG TTGCAGATCT GCGAGCGACT GGGGCTCTGA
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| Protein sequence | MTTTPSLPLS LEFFPPKTPE GVTKLAAARQ ALYALQPQFC SVTYGAGGST QDGTLATVQA
ILDEGWQGAS HFTCIGATRE SVRERLAQFK AMGMRRIVAL RGDLPSGYGA FGEFRYASDL
VAFIRAETGD HFHIEVAAYP EMHPQARSPQ ADLQAYAAKV QAGADSAITQ FFFNADAYWR
FVDDAQALGA RIPVVPGIMP ITNSSGIIRF ADGSGAEIPR WIRLRLQSYG DDSASIKAFG
LDVVTDLCER LRAGGVPALH FYTMNSSAAV LQICERLGL
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