Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0084 |
Symbol | |
ID | 6160350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 86507 |
End bp | 87097 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641662828 |
Product | restriction endonuclease |
Protein accession | YP_001789124 |
Protein GI | 171056775 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00892855 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCAAGA ATTCGCTGTT TGCCGTGCTG CTGCGTTCGC GGTGGTGGGT CAGCGTGTGC ATCGCCGGGG TGATGGCGCT GCTGGCCTGG GTGGTGCTGC CCGAGGACTA CCGTGTGGCC GGCGTGCTGG GCTGTTTCCC GTTCCTGGTG ATCGGTGCGA TGGCGGCGTG GCGTCAGCGC GATCTGCCCA GCCCGGCCCG GGTCGGGCAG ACGCTGGAGG CCGTCGGCGC CATGCCCTGG CCGGCGTTTT CGGCCTTGCT GGAACAGGCC TTCCGCCGCG ACGGTCATGC GCTGCAGCGG CGCAGCGGGG CGGTCGACTT CGCGCTCGAA CGCCAGGGCC GGCACACGCT GGTGAGCGCG CGGCGCTGGA AGTCCGCCCG CACCGGCCTG GAGCCGCTGC GCGAACTGCA GGCCGCCCGC GTGGCCCGCG AGGGCGACGC CCTGCCCGAC GCGATCTACA TCGGCCTGGG CGAGCCCAGC GACAACGCCC GGGCCTACGC CGCCGAACAC GGCATCACCC TCTGGCAAGC CGCCGAACTG GCGCACGCAC TGCGCGGCCT GCCGCTGCCG GCGACGCCGC CGACGCGCTG A
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Protein sequence | MAKNSLFAVL LRSRWWVSVC IAGVMALLAW VVLPEDYRVA GVLGCFPFLV IGAMAAWRQR DLPSPARVGQ TLEAVGAMPW PAFSALLEQA FRRDGHALQR RSGAVDFALE RQGRHTLVSA RRWKSARTGL EPLRELQAAR VAREGDALPD AIYIGLGEPS DNARAYAAEH GITLWQAAEL AHALRGLPLP ATPPTR
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