Gene Lcho_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0070 
Symbol 
ID6160177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp74058 
End bp74654 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content70% 
IMG OID641662814 
Producthypothetical protein 
Protein accessionYP_001789110 
Protein GI171056761 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAG GAAACCTGCG GCGGGCGCTG ATCGGCGCCT CGCTGTTCGC CGGTGCCGGC 
CTGGTGTCGG CCATCGCCAC GCCCGCGCGC GCCGAAGACC CGCGCGAACG CCTGCGCCGC
AAGCGCCTGC ACAACCTGCC CCTGCTCACC CAGGACGGCC GGACGGTGCG CTTCTACGAC
GACGTGGTGA AGGACCGCAA GGTCGTCATC AGCGTGATGT ACACCGGCTG CAGCAACATC
TGCACGCCCG CCACCCGCAA CCTGATGGAG GCGCGCGAAC GCCTCGGCGA CTTCGGCCGC
GACATCCATT TCGTCTCGAT CTCGCTGACC CCGCTGACCG ACACGCCCGC CGAACTGCGC
GCCTACAAGA AGGCCCACGG CATCGGCGCC GACTGGACCT TCCTGACCGG CAAGCCGGCG
CACGTCGAAC AGGTCACGCG CGGCCTCGGC CTGCTCAGCG AAGACCCGGC CGACGACCTG
CTGAGCCACT CGGGCAGCGC CGTCATCGCC GACGAGAAGC TCCTGAAATG GGGCCACGGC
TCGACCCTGA CGGGCGGCCG CGCGCTGGCG CGCATGATCC GCTTCGAGCT GGTCTGA
 
Protein sequence
MLEGNLRRAL IGASLFAGAG LVSAIATPAR AEDPRERLRR KRLHNLPLLT QDGRTVRFYD 
DVVKDRKVVI SVMYTGCSNI CTPATRNLME ARERLGDFGR DIHFVSISLT PLTDTPAELR
AYKKAHGIGA DWTFLTGKPA HVEQVTRGLG LLSEDPADDL LSHSGSAVIA DEKLLKWGHG
STLTGGRALA RMIRFELV