Gene Lcho_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0066 
Symbol 
ID6160173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp68084 
End bp68527 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content75% 
IMG OID641662810 
Productputative cytochrome c, putative SoxX protein 
Protein accessionYP_001789106 
Protein GI171056757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGA GCGCCATCAC GCTCGGTCTG CTGGCCGGGT GGCTGGGCTC GGCCGCGGCG 
AACGGCGTGG TCGCGTTCGA GGTGGTCGGC GACGCGATCC CCGCGCCGCT CACCACGGCC
CCGGCCGACG CCGCACGCGG GCGCGCCATC GTCGCCAGCC GGCAGACCGG CCTGTGCCTG
CTGTGCCACC GCGGGCCGTT CCCCGAGGTG CGTTTCCAGG GCAACCTGGC GCCCGACCTG
GGCGGCGCGG GCGCACGCTG GTCGGCGGCA CAACTGCGCC TGCGGCTGGT CGACGGCCGG
CGGCTCGATC CGCAATCGAT CATGCCGGCG TATCACCGCG TCGACGGCCT GGTGGACGTG
GCTGCGGCGT GGCAGGGCCG GCCGTTGCTG AGCGCGCAGC AGATCGAGGA CGTGGTGGCC
TACCTCGTCA CGCTCAAGGA GTGA
 
Protein sequence
MRQSAITLGL LAGWLGSAAA NGVVAFEVVG DAIPAPLTTA PADAARGRAI VASRQTGLCL 
LCHRGPFPEV RFQGNLAPDL GGAGARWSAA QLRLRLVDGR RLDPQSIMPA YHRVDGLVDV
AAAWQGRPLL SAQQIEDVVA YLVTLKE