Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0053 |
Symbol | |
ID | 6160000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 57758 |
End bp | 58564 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641662797 |
Product | hypothetical protein |
Protein accession | YP_001789093 |
Protein GI | 171056744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAACA AGAACTCACA GCAGATCATG CCGGTGCGCG TCAGGACGTC TTGGCGCAGG CCGATCCGCA CCGTCGCGAC CGCCTGCACA TGGCTGGCCC TGGCGGTTGC CGCGCAGGCC GGAATGGATG GGGGTGGTGG CAGCTCACGC AAGACGGATA CCGGTCACGA CGGGTCGCAA GCGGCGCGCT CGAGCGAATC GGCCCGGTCG GAACACTCGA GGGGCAACTG GCAGGGGCGA CCCATGGCGC AGTGGGTGCC GACGTTCTGG CGCTGGTTCT TTTCGGTGCC GGCCAGTGTG GGCGCCACGG ACACCACGGG CGTGCAATGC GGCCTCCATC AGGAAGGGCC GGTGTGGTTT CTTTCTGCGC CGCTGGGTGG TCAGGGGCCG TTCGAGCGGA CTTGCACGGT ACCGCGCGGC AAGGCGATCT TCACGCCGGT CGCTACCTTC CTGAACGACT ACCCCTGCCC CGACCCGACA TTCAAGCCGG CTGCCGGGCA GTCGCTGGAC GATTTTCTGG GCAGCGGTCT GGTCGACATC ATCGACAGCT TCACCCTGCT CGAAGCCAGC CTGAACCACC GCCCGATCAA AGTGCTGCGT CTGACGACAC GCACCTTCGG CTTCACTGGC GCGGTGGACT GGAAGGGCAT CGATCAGTGC ATCACGGGTT CACCGCAGAG CGGTTTGAGC GACGGCTACT TCGTCGCCAT CGAACCGTTG CCGCCCGGCA CCCACGAACT GCGGGTCAAA TCCTTCAGCA GTTTCTTCGG CCTCACCGAG GGCACGTTCA AGCTGGAAGT GCGTTGA
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Protein sequence | MLNKNSQQIM PVRVRTSWRR PIRTVATACT WLALAVAAQA GMDGGGGSSR KTDTGHDGSQ AARSSESARS EHSRGNWQGR PMAQWVPTFW RWFFSVPASV GATDTTGVQC GLHQEGPVWF LSAPLGGQGP FERTCTVPRG KAIFTPVATF LNDYPCPDPT FKPAAGQSLD DFLGSGLVDI IDSFTLLEAS LNHRPIKVLR LTTRTFGFTG AVDWKGIDQC ITGSPQSGLS DGYFVAIEPL PPGTHELRVK SFSSFFGLTE GTFKLEVR
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