Gene Lcho_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0052 
Symbol 
ID6159824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp57209 
End bp57577 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID641662796 
Productglobin 
Protein accessionYP_001789092 
Protein GI171056743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGT CCCTCTACGA ACGCCTCGGC GGCGAGGACC GCATCCAGCG CCTTGTCACC 
GACATCGTCG ACAACCACTT GCGCAATCCG CTGATCCGGA CCCGCTTCGA GAAGTACAAC
GACGCCGAGC GGGCCGTGAT CGAACGCCAC GTCACCGAGT TCTTCTGCAT GGGCAGCGGC
GGGCCGCAGG CTTACACCGG CAAGGACATG CTGACCACGC ACAAGGGCAT GAACATCAGC
GAGCAGGAGC TGATTGCGGC GATCGACGAC ATCGTCGCGG CGATGGCCAA GCACGGCTAC
GGCGACACCG AGCGGAACGA GGTCGTGGCG ATCCTGTATT CGCTCAAGGG CGACGTCGTG
CGCGTCTGA
 
Protein sequence
MTQSLYERLG GEDRIQRLVT DIVDNHLRNP LIRTRFEKYN DAERAVIERH VTEFFCMGSG 
GPQAYTGKDM LTTHKGMNIS EQELIAAIDD IVAAMAKHGY GDTERNEVVA ILYSLKGDVV
RV