Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0036 |
Symbol | |
ID | 6160130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 39642 |
End bp | 40580 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641662781 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001789077 |
Protein GI | 171056728 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.700183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACAC AACCTGCTCC CCCTGCCGAC GCCGTGATCG TGCGCGAAGT CGGCCTGCGC GACGGCCTGC AGAGCATCCA CCGCACGCTC GCCACCGACC ACAAGCTCGA CTGGCTGCGC GCAGCCCATG CCGCCGGCCT GCGCGAGATC GAGGTCGGCT CCTTCGTGCC GGCCAAGCTG CTGCCGCAAC TGGCCGACAC CGCCGAGCTG GTGGCGGTGG CGCGCACGCT GCCCGGGCTC GTCACCTCGG TGCTGGTGCC CAACCTGAAG GGCGCGCAGG CCGCGCTCGA CAGCGGCGCC GACCTGATGC TGCTGCCGCT GTCGGCCAGC CACGCGCACA GCCTGGCCAA CCTGCGCAAG ACACCCGACG ACGCGGTGGC CGAGGTCGGC CGCATCCGCG CCTTGCGCGA TGCCAGCGGC TCGCGCTGCC TGATCGAGGT CGGCATGAGC ACGGCCTTCG GCTGCACCAT CCAGGGCCGG GTCGACGAGG CCGAGGTGCT GCGCCTGCTG CAGGCCGCGC TTGATGCCGG CGCCGACCGC GTCGGCCTGG CCGACACCGT GGGTTACGCC GATCCGCAGC AGGTGGCGCG GCTGTTCGAG AAGAGTTTTG CCGTGGCCGG CGATCGGCTC GCCTGCGGTC ACTTCCACGA CACCCGCGGC CTCGGCATGG CCAACGTCTA CGCCGCCTGG CTGGCCGGCG TGCGCCGCTT CGACGCCTGC CTGGGCGGCA TCGGCGGCTG CCCGCACGCG CCCGGCGCCA GCGGCAACGT GGCGACCGAG GATCTCGCCT ACCTGTTCGC CAGCATGGGC GCGCCGACCG GGCTCGACTT CGACGCACTG ATCGCCCTGC GTGCGCGGCT GGCCCAATGG CTGGCCGGCG AAACCCTGCA CGGCTCGCTG TGGCGTGCCG GCCTGCCCAA AACGATGTTG AGTGCCTGA
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Protein sequence | MHTQPAPPAD AVIVREVGLR DGLQSIHRTL ATDHKLDWLR AAHAAGLREI EVGSFVPAKL LPQLADTAEL VAVARTLPGL VTSVLVPNLK GAQAALDSGA DLMLLPLSAS HAHSLANLRK TPDDAVAEVG RIRALRDASG SRCLIEVGMS TAFGCTIQGR VDEAEVLRLL QAALDAGADR VGLADTVGYA DPQQVARLFE KSFAVAGDRL ACGHFHDTRG LGMANVYAAW LAGVRRFDAC LGGIGGCPHA PGASGNVATE DLAYLFASMG APTGLDFDAL IALRARLAQW LAGETLHGSL WRAGLPKTML SA
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