| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0005 |
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| Symbol | |
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| ID | 6160264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 6287 |
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| End bp | 7186 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641662750 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001789046 |
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| Protein GI | 171056697 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000472408 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCAATT TCAAGCACCT GCACTACTTC TGGGTCGCCG CCAAGGCCGG CGGCATCGTG
CGCGCCGGTG AACAGCTGCA CATCACCCCG CAGACCCTGT CGGCGCAGAT CAAGCAGCTG
GAAGAACGGC TGGGCTGCGC GCTCTTTCGC AAGCAGGGCC GGGGGCTGGA GCTGACCGAC
GAGGGGCGGG TCGCGCTCGG TTACGCCGAT CAGCTGTTCG CCATCGCCGA CGAACTGGAG
ACGGTGATCG GCAGCACGCG CAGCGGCCAG CAAGTGCTGA GCTTTCGGGT CGGCATCGCC
GACTCGGTGC CCAAGGCGAT CGCCTACCGC CTCATCGAGC CGGCGCTGGA CGCCGCGGCG
CACGTGCGGC TGATCTGCCA TGAAGGCAAG TTCCAGGATC TGCTGGCGCA GCTGGCGGTG
CACCGGCTCG ACCTCGTGAT CGCCGACGAG CCGATGGGCC GCCAGCTCAG CATCCGGGCC
TTCAACCACA CGCTCGGCTC CACGGCGACG AGCTTCTTCG CCACGCCGGA ACTGGCGCGC
CAGCTCCAGG GCCCGTTTCC GCAGTGCCTG GACGGTGCGC CGATGCTGCT GCAGGGGCCG
GCCTCGGCCA TGCGGCGCCG GCTCGACACC TGGCTGGCCG AGCAGCACCT GCGGCCGCGC
GCGATCGCCG AGTTCGACGA CGCCGCGCTG ATGAAGGCCT TCGGCAGCGA GGGCCGCGGC
GTGTTCATGT CGCCCACCGT GCTGGAGGCC GAGACGCAGG CGCAGTACGG CGTCGACACC
ATCGGCCGCA CCGAGGAACT GGTGGAGGAG TTCTACGCCA TCTCGGCCGA GCGGCGCATC
ACGCATCCCT GCGTGGTGGC CGTCACCAGC GCCGCGCGCG GCAAGCTGCT GCGCGGGTGA
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| Protein sequence | MLNFKHLHYF WVAAKAGGIV RAGEQLHITP QTLSAQIKQL EERLGCALFR KQGRGLELTD
EGRVALGYAD QLFAIADELE TVIGSTRSGQ QVLSFRVGIA DSVPKAIAYR LIEPALDAAA
HVRLICHEGK FQDLLAQLAV HRLDLVIADE PMGRQLSIRA FNHTLGSTAT SFFATPELAR
QLQGPFPQCL DGAPMLLQGP ASAMRRRLDT WLAEQHLRPR AIAEFDDAAL MKAFGSEGRG
VFMSPTVLEA ETQAQYGVDT IGRTEELVEE FYAISAERRI THPCVVAVTS AARGKLLRG
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