Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1882 |
Symbol | |
ID | 4438909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1873820 |
End bp | 1875088 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639673698 |
Product | cystathionine beta-lyase family protein |
Protein accession | YP_819575 |
Protein GI | 116630422 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4100] Cystathionine beta-lyase family protein involved in aluminum resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00000000000688735 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTTTAT CTTGGAAAGA AAACTTACCA ACAGAATTAA AAGAAAAAGT CGATAAAGTC GACAAAATAA TTGAACCTCG TTTAGAAGAA ATTGACGAAC AAGTTTTTTA TAATCAGCAA CGCGTTTTAG ACCTATTTAG AAAACACCGC GTAGGAGAAG AAGATCTAGT TCCTTCAACT GGCTATGGTT ATGATGATGT TGGTCGTGAC AAGCTTGAAG CAATGTATGC CGACTACTTT AAAACAAACG ACGCTTTAGT CCGTCCACAA TTTTCTTCAG CAACACATGC GATTGCTGTT GGTCTTTTCA GTATGCTTCG CCCTGGTGAT ACTCTTTACT ACTTAACTGG TATGCCATAT GACACAATTC AAGAAGTTAT TGGTTTAGCA GGCAACAAAC CAGGAAACAT GAAAGAGTGG GGCATTGACT TTAAGCATAC TGACTTACTT GACAATGGCG AAGTAGACTA TGATCAAGCC AGAAAAGACT TACAAGATCC AAAGATTAAA GTCGTAACGA TCCAACGTTC TCTTGGTTAT GCTGTACGTG CAAGTTTCAC CATGGAAAAA ATCAAGAAAA TGCTTAAGTT CATCAAAGAA GTTCGTCCAG ATGTAAAGAT CTTCGTTGAT AATTGCTATG GTGAATTTTC TGAAACCGAA GAGCCAACTT TCTACGGTGC CGATATGATG GCAGGATCTC TATTTAAGAA TGCTGGTGCT GGTATTGTTA AAGCAGGTGC TTTCTTAGTT GGTAAAAAAG ACCTAATTGA AGGAGCAGGT TCTCGTCTTA ATGTTCCAGG TGCTGGTAAA GGAGAAGGCG CTACTTGGGG CTATCTAAGA GACATGTACC AAGGCTTCTT TATGGCACCC CACACTACTG GTGAAGCTTT AAAAGGTATG ATTTATACTG CCGCTCTTTG CGAAGAAATG GGGATGAAAG TTGCGCCTAA GTGGAATGAT CCAAGAACTG ATATTGTTCA AACAGTAACC TTTGGAGAAC CTGATCCAAT GGTTAAATTC TGTGCTGCAA TTCAACATTA CTCACCAATG AACTCATTTG TTGATCCTAT TCCATACCAC CAAGATGGTT ATGAAGATGA TGTTGTTATG GCTTCAGGTA GCTTTACTGA AGGTTCTACA ATTGAATTAT CTTCAGATGG CCCTCTTCGT GCACCTTACC GTCTATATAT TCAAGGTGGT TTGTCTTACG CTCATGATAA GATCGCAATC ACTCATGCAG TGGAAGAGAC TTTCTACAAA AAAGATTAA
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Protein sequence | MVLSWKENLP TELKEKVDKV DKIIEPRLEE IDEQVFYNQQ RVLDLFRKHR VGEEDLVPST GYGYDDVGRD KLEAMYADYF KTNDALVRPQ FSSATHAIAV GLFSMLRPGD TLYYLTGMPY DTIQEVIGLA GNKPGNMKEW GIDFKHTDLL DNGEVDYDQA RKDLQDPKIK VVTIQRSLGY AVRASFTMEK IKKMLKFIKE VRPDVKIFVD NCYGEFSETE EPTFYGADMM AGSLFKNAGA GIVKAGAFLV GKKDLIEGAG SRLNVPGAGK GEGATWGYLR DMYQGFFMAP HTTGEALKGM IYTAALCEEM GMKVAPKWND PRTDIVQTVT FGEPDPMVKF CAAIQHYSPM NSFVDPIPYH QDGYEDDVVM ASGSFTEGST IELSSDGPLR APYRLYIQGG LSYAHDKIAI THAVEETFYK KD
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