| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1877 |
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| Symbol | |
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| ID | 4438939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1866875 |
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| End bp | 1867741 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 639673693 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_819570 |
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| Protein GI | 116630417 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01716] transcriptional activator, Rgg/GadR/MutR family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00000000115025 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGTTG GTGAATTGCT TAAAGAATAT CGCGTAAAAC AAAATAAAAA TCAGAAAGAG
TTTTCGGCTG GAATTGTTAG TCAGTCTTAC TATTCTAAAG TTGAAAAGAA TATTCATCGA
ATTACTGCTG ATGATTTGTT ATTGCTTCTA ACGCATAATG CCATTTCAGT TAAGACTTTT
TTTGAAAAAC TAGAAATAGA TCCACATCAA GAGCAGGTAA ATAAAGTTAA TGCCATTTTT
GAGGAAATAA CTAAAGCTAA TTATGCAGAT AATTCATTAG CTCAAATTAA AAAAATTAAG
GCAAAAGCTG TTAAATTAGA TGTCGAAGCT GATATGAAGA AAGATATGCT GCTGATAATT
GATGGTGTTT TAGAATCAGA AAAAGACGAT CCTGAAACTT TTGACATTAA TTTAAGAAAT
CAGCTAAAAG AAAAGATATT CTTAATGCCA GAATATGATA CTTATAAATT ATCAGTCTAT
GCGAATTTTG TAGATTTATA TGATTTTGAT AGTAATCAGC AAATAATTAG ACAGATTGTT
AAAGCATTAA AAAAGAAAAA AGTCGAAAGG CAAGACGAAA TTTTATTTGC GATTATACTG
AATGTATTAA AGCAGGGAAT TGAAGAGAAA AAATATAATG AAACAAATAA GCTTATCAGT
CTAGGCCAGC AAATTAAGGT TATCCCTGAA TTTTTTCTTT ATCGTGAAAT GCTTACTTTT
TATGAAGAAC TAATTGCTTA TCACACTGAT AGAAAGGCAA GACATTTAAA GAAGTGTAAA
TTGATTCTAA AAAGTTTTGA ATGGGGTGGG ATGTCAGCTT TTGGTAAAGA GATGATAAAA
TTTTTGGATA AATATAAAGA ACAATAG
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| Protein sequence | MTVGELLKEY RVKQNKNQKE FSAGIVSQSY YSKVEKNIHR ITADDLLLLL THNAISVKTF
FEKLEIDPHQ EQVNKVNAIF EEITKANYAD NSLAQIKKIK AKAVKLDVEA DMKKDMLLII
DGVLESEKDD PETFDINLRN QLKEKIFLMP EYDTYKLSVY ANFVDLYDFD SNQQIIRQIV
KALKKKKVER QDEILFAIIL NVLKQGIEEK KYNETNKLIS LGQQIKVIPE FFLYREMLTF
YEELIAYHTD RKARHLKKCK LILKSFEWGG MSAFGKEMIK FLDKYKEQ
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