Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1855 |
Symbol | |
ID | 4439216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1846567 |
End bp | 1847697 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673671 |
Product | L-alanine-DL-glutamate epimerase/enolase superfamily-like protein |
Protein accession | YP_819548 |
Protein GI | 116630395 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR01928] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00000301003 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCAAAAA GCAATAGTTC CAGCTTATAT ATGGATGATC GATCAATTAG AGCAGAAGAA AGGAGTGATA AATTAATGAA TTTAAAAATT AAAAATATTA CATGTTCCAT TAAAAAAGTC CCATTAAAGA GACCGTTTAT TACTGCCTTA CACAAAGTCA CAGAAATTGA AGGACTGAAA ATTGTTGTTG AATTAAGCGA CGGTCAAACA GGTACCGGAA CTGCAACTCC TAATGAAAAA GTCACCGGCG ACACCTTACA AAGCTCGTTA GATATTGTTA ATCAAGTCAT TAAACCTGCA TTAATAAACC AAGACTTCAA AAATTGGAAC AAACTTTTAA CCACACTTCA AACCTGCATC GTTCATAATA CTGCCGCAAA AGCAGCAATG GATATTGCCT TATATCAATT AAAGGCTAAA GAAAACAATG AATCTCTAGT CAACCTGCTT GGCAGTGAAA AAGGTAAATT AACAACCGAC TATACAATTA GTATCGGTTC AGATGACCAT ATGGTTTCTG AAGCTAAATC CTTAGTTAAA GACGGCTTTA CTGCTATCAA AATTAAATTA GGCAACAATT CTGTGAGTCA TGATATTAAA ACCATTCAAA AAATTAGTAA AGCGGTTGGT CCTGATATTT CCTTACGTAT TGATTGCAAT CAAGCCTGGA ATTACAAAGA CACTTTAAAA GCTAGTCGAA TCTGGGCACA GGATAATTTA AATATTGATT TTATTGAGCA ACCTGTTCTA AAAGACGCAA TCTCAGATTT AACTTTATTA AGCGAAAATT CACCTTACCC AATTATGGCT GACGAAAGTG TCGCTTCATA TCAAGATGCC ATTAACTTAA TCAAACATCA CGCTTGTGAC TACATCAACA TTAAGTTAAT GAAAACTGGT GGCTTATCAG AGGCAATCAA AATTAACGAT TTAGCACAGG CTTGTGGTAT TAAAACTATG GTTGGTTGCA TGATTGAGCC GGTTGAAAGT ATTGCCGCAG CTGCTGCATT TGCTGTTGCA AATAAAAATG TTAAATTTAT TGATCTCGAT TCAATTTTTA TGGCTACACA AGATCCCGAT CTTGGTAAGT ATTTAAAAAT TAAAAATAAT GAAATTATTC TAAAGGACTA A
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Protein sequence | MAKSNSSSLY MDDRSIRAEE RSDKLMNLKI KNITCSIKKV PLKRPFITAL HKVTEIEGLK IVVELSDGQT GTGTATPNEK VTGDTLQSSL DIVNQVIKPA LINQDFKNWN KLLTTLQTCI VHNTAAKAAM DIALYQLKAK ENNESLVNLL GSEKGKLTTD YTISIGSDDH MVSEAKSLVK DGFTAIKIKL GNNSVSHDIK TIQKISKAVG PDISLRIDCN QAWNYKDTLK ASRIWAQDNL NIDFIEQPVL KDAISDLTLL SENSPYPIMA DESVASYQDA INLIKHHACD YINIKLMKTG GLSEAIKIND LAQACGIKTM VGCMIEPVES IAAAAAFAVA NKNVKFIDLD SIFMATQDPD LGKYLKIKNN EIILKD
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