| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1794 |
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| Symbol | |
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| ID | 4438993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1781036 |
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| End bp | 1781839 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639673611 |
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| Product | mannose-specific PTS system component IIC |
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| Protein accession | YP_815622 |
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| Protein GI | 116630347 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000038992 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 1.3997e-24 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGCTA TTCAGATGAT TCTGGTAGTG GTCGTTGCCT TCTTTGCAGG TATGGGAGGA
ATTCTTGACG AATTCCAATT CCATCAACCT CTAGTGGCAT GTACTTTAAT TGGTTTAGTT
ACTGGTAACT TAACTATAGG TATTATTCTT GGCGGTTCAC TACAAATGAT TGCTTTAGGT
TGGGCTAATA TTGGTGCTGC TGTTGCGCCT GATGCTGCTT TAGCATCTGT TGCTTCAACT
ATTATTTTGG TACAAGGTGG ACAAGGACAA AAGGGTATTG GTACTGCTAT TGGTATTGCT
ATTCCATTGG CTGTTGCTGG TTTATTCTTG ACTATGTTAG TTCGTACTAT TTCAGTTGCT
ATTGTTCATA TTATGGATAG AAAAGCAGAA GAAGCTAACT GGAAAGCTAT TGATCGTTGG
CAAATGATTG CTGTTGCTTT ACAAGGCTTA AGAATTGCTA TTCCAGCAGC TTTATTACTT
GCCATTCCTG CTTCCGTTGT TCGTGCTGGT TTAAACGCAA TGCCTGCTTG GTTAAATGAA
GGTATGACCA TCGGTGGTGG TATGGTTGTT GCCGTAGGTT ACGCAATGGT TATTAATATG
ATGGCTAGTC GTGAAGTATG GCCATTCTTC ATTATTGGTT TCTGTTTAGC AGCTGTTAAG
GAATTAACTT TGATCGCTCT TGGTGGTATT GGTATTTCAC TTGCTATTAT GTACCTTGCT
CTTGAAGGTT CTAAAGGTGG AAACAATAAC AACTCTAATT CTGGTTCAGG CGACCCATTG
GGCGACATCC TGGATGACTA TTAA
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| Protein sequence | MNAIQMILVV VVAFFAGMGG ILDEFQFHQP LVACTLIGLV TGNLTIGIIL GGSLQMIALG
WANIGAAVAP DAALASVAST IILVQGGQGQ KGIGTAIGIA IPLAVAGLFL TMLVRTISVA
IVHIMDRKAE EANWKAIDRW QMIAVALQGL RIAIPAALLL AIPASVVRAG LNAMPAWLNE
GMTIGGGMVV AVGYAMVINM MASREVWPFF IIGFCLAAVK ELTLIALGGI GISLAIMYLA
LEGSKGGNNN NSNSGSGDPL GDILDDY
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