| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1793 |
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| Symbol | |
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| ID | 4438992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1780078 |
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| End bp | 1781007 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639673610 |
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| Product | mannose-specific PTS system component IID |
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| Protein accession | YP_815620 |
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| Protein GI | 116630346 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000964507 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 8.06003e-28 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTGAAA CTGCAAAAAA GAAATTAACT TTAAGTAAAT CAGATCGTAT TAAGGTTTGG
TGGCGTTCTA CTTTCCTTCA GGGTTCATGG AACTACGAAA GAATGCAAAA CGGTGGTTGG
GCATACAGTT TAATCCCAGC CTTAAGAAAA TTGTATCCAG AAAAGAAGGA TTTATCTCTT
GCATTAAAGA GACACCTGGA ATTCTTTAAC ACACACCCTT ACTTAGCATC ACCTATTATT
GGTGTTACTC TTGCCTTAGA AGAGGATAAG GCTAACGGTG CCGATGTTGA TAACACTGCT
ATTCAAGGTG TTAAAGTTGG TATGATGGGT CCTTTAGCTG GTGTTGGTGA CCCTGTATTC
TGGTACACGG TTCGTCCTAT TATTGGATCA CTAGGTGCTT CACTTGCTTT GAGTGGAAAT
ATCTTAGGTC CTATCCTATT CTTTGTATTA TGGAATGTAA TTCGTATGGC ATTCTTATGG
TACACTCAAG AAATGGGTTA CAAAGCTGGT ACTAAGATTA CTGAAGATGC TTCAGGTGGT
TTATTACAAA AGATCACTCG TGGTGCTTCA ATGATGGGTA TGTTTGTTAT CGGTGCCTTA
ATTGAACGTT GGGTAACGAT TAACTTTAAG CCAGTTGTTT CAAGTGGTCC ACTTCAAAAG
GGTGCTTACA TCGATTGGAA CGCTCTTCCA AAGGGTGCAG AAGGCATTCA CAAAGCATTA
TCTGAATATA ATTTAGGTAA TGGTATGGCC TTAGATAAAA TTAAGGAAAC AACTTTGCAA
CAAAACTTAG ATAGTTTGAT TCCTGGTCTT GCTGCATTGC TATTAACTTT CTTATGTATG
TGGCTACTAA AGAAGAAAGT TTCACCAATT GTTATTATTA TTGGTATCTT CGTTGTTGGT
ATTTTAGGTC ACGTAATTGG CTTACTATAA
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| Protein sequence | MTETAKKKLT LSKSDRIKVW WRSTFLQGSW NYERMQNGGW AYSLIPALRK LYPEKKDLSL
ALKRHLEFFN THPYLASPII GVTLALEEDK ANGADVDNTA IQGVKVGMMG PLAGVGDPVF
WYTVRPIIGS LGASLALSGN ILGPILFFVL WNVIRMAFLW YTQEMGYKAG TKITEDASGG
LLQKITRGAS MMGMFVIGAL IERWVTINFK PVVSSGPLQK GAYIDWNALP KGAEGIHKAL
SEYNLGNGMA LDKIKETTLQ QNLDSLIPGL AALLLTFLCM WLLKKKVSPI VIIIGIFVVG
ILGHVIGLL
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