| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1780 |
|---|
| Symbol | |
|---|
| ID | 4439010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1765727 |
|---|
| End bp | 1766719 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639673597 |
|---|
| Product | sucrose operon repressor |
|---|
| Protein accession | YP_815597 |
|---|
| Protein GI | 116630333 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000000000248781 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAATGG TTAAATTAAC CGACGTAGCT GCTAAAGCAG GCTGTTCTGT AACTACCGTT
TCACGAGTAA TTAATAATTA TGGCTATATT AGTCAAAAAA CAAGAAAAAA AGTTCACGAA
GCAATGAGAG AGCTGAATTA TCAGCCAAAT TCTGTTGCCC GCTCTCTTCA AGGAAAGAAA
ACCAAGCTTA TTGGTTTAAT TTTTCCAGAT GTATCTAATC CATTTTTTGG TGAATTAGTT
TCTAAAATTG AAGACCAATT ATTTAATCAC GGCTACAAAA CAATTCTTTG CAATGCTGGC
AATGATACAG AGAAGGAACG GACCTATTTG CAAATGCTCA TGGCTAATCA GGTAGATGGG
ATTATTGCTG GAGCTCATAA TCTGGGAATC GAAGAATATC AAAGAACTGG TCTACCGATT
GTTTCCTTTG ATCGTAAGCT TTCAGATAAC ATTCCAATTG TTAGTGCCGA TAACTTCAAA
GGTGGCAGTT TAGCTACCCA AGAACTTTAT AATCATGGTG CTCGTCATAT CTATTTTGTA
GGAAATCCAA CGCTAGATGG ACACCCTACG CAAAAGAGAC TGCTTGGCTA TAAAGAAACA
ATTAAGGAAT TGCAATTAAC GGAGCATATT CATCCAGTAA TTTTTAATGA AACTCTTGCA
TTAAAAGAAA TGGCAATTAA AGACTTACTA GAGAATCATA AAGTAGACGG GATCGTAGCA
TCTGACGATC TTACTGCTCT TCTGATCATG AACATTAGCC ATGACTTAGG AATCAAAATT
CCTAAAGATT TAAAGATTAT TGGATTCGAT GGGAGCAAAG TAGTACGTGA TTTTGAACCA
CGTCTGTCTA CAATTGTCCA ACCTATTCCT TCAATTGCAC AACTACTTGT TAAGCTTTTA
GAAAAAAGAA TCGACAATCC TACTGAAAAA TTAGATAACT ATACATACTA CCTGCCAGTA
GAATTACTTA AGCGTGAATC TAGTGGAAAC TAA
|
|---|
| Protein sequence | MTMVKLTDVA AKAGCSVTTV SRVINNYGYI SQKTRKKVHE AMRELNYQPN SVARSLQGKK
TKLIGLIFPD VSNPFFGELV SKIEDQLFNH GYKTILCNAG NDTEKERTYL QMLMANQVDG
IIAGAHNLGI EEYQRTGLPI VSFDRKLSDN IPIVSADNFK GGSLATQELY NHGARHIYFV
GNPTLDGHPT QKRLLGYKET IKELQLTEHI HPVIFNETLA LKEMAIKDLL ENHKVDGIVA
SDDLTALLIM NISHDLGIKI PKDLKIIGFD GSKVVRDFEP RLSTIVQPIP SIAQLLVKLL
EKRIDNPTEK LDNYTYYLPV ELLKRESSGN
|
|---|
| |