| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1511 |
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| Symbol | gatB |
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| ID | 4439301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1502316 |
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| End bp | 1503746 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639673338 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_815304 |
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| Protein GI | 116630132 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.994441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTA AATCGACTAT TGGTCTAGAA GTCCACTTCG AATTAAAAAC AAAGAGTAAG
ATTTTTTCTC CATCACCAGT TACTTATGGT GCTGAAGCAA ACACTGAAAC TAATGTTATT
GACTGGGCAA TGCCTGGTGT CTTACCTCGT TTGAATAAAG ATGTTTATCG TCTTGGTATC
ATGGTTGCCT TGGCAACTCA TTCACATATT TTGCCTGTAA CTCATTTTGA CCGTAAGAAC
TACTTCTACC CAGATAACCC TAAGGCTTAC CAAATTACTC AGTTCTTCCA ACCACTTGCT
CGCGATGGTT ACATTGAAGT TGAAGTTCGC GGCAAGAAGA AGCGCATTGG TATTCACGAA
ATGCACATCG AAGAAGATGC TGGTAAGAAC ACTCACGGAG CTAATGGTTA TTCATACGTT
GACTTAAACC GTCAGGGTGT TCCACTTCTT GAAGTTGTTT CTGAACCTGA TATGGAAGAT
CCAGAAGAAG CTTACGCATA CTTGACTAAA TTACGTCAGA TCGTTCAATT TACTGGTGCA
TCTGACGTTA AGATGGAAGA AGGTTCAATG CGTGTTGATA CCAACATTTC TATCCGTCCT
GCTGGTCAAG AAAAGCTTGG TACTAAGGTT GAAATGAAGA ACTTGAACTC ATTTGACCAC
GTTCGTCGTT CTCTTGCTTA TGAAGAGAAG CGTCAACAAC AAGTACTTCT TTCTGGTGGT
AGAGTTCAAC TTTCCACTCG TCGTTTTGAT GAAGCTACTG GTAAGACTGT CTTAGAGCGT
GTTAAGGAAG GCGATGCAGA TTACCGTTAC TTCCCAGAAC CAGATATTGC ACCTTACCAC
ATTAAGCAAA GCTGGATCGA TGAAATTGCA GAAAGTTTAC CTGAATCACC ATTTGAACGT
CGCAAGCGCT ACGTTAAAGA ATATGGCATT AAGGAATACG ATGCTGACGT TATTTTGCAA
ACTAAGGAAT CAAGTGATTT CTACGATGCT GCAGTAGCTG CTGGTGCTGA TCCAACTTTA
GCTGCTAACT GGTTGAATAC TCAAGTTAAT GGTTACTTGA ATGAAAACCA AGTTGGTATT
GCAGATATTA AATTAACTCC AGAGCACTTA GCTGAAATGA TCAAGATGAT CAAAGATGGA
ACTATTTCAT CCAAGATTGC TAAGAAAGTC TTCAAGGAAT CTATTGAAAA TGGAACTGAT
CCTAAGAAAT ATGTTGAAGA TAAGGGTATG GTTCAATTAT CAGATGTTTC TGTTCTTGGG
CCAATGGTAA CTAAGGTTGT TGATGATAAC CCACAATCTG TTGAAGACTT CAAGAATGGT
AAGGATCGTG CAATTGGATT CTTAGTTGGT CAAATCATGA AGCAAACTCG TGGTAAGGCT
AACCCTAAGG TTGTTAATCA ATTGCTTAAT AAGGAACTTC AAAGCCGTTA A
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| Protein sequence | MNFKSTIGLE VHFELKTKSK IFSPSPVTYG AEANTETNVI DWAMPGVLPR LNKDVYRLGI
MVALATHSHI LPVTHFDRKN YFYPDNPKAY QITQFFQPLA RDGYIEVEVR GKKKRIGIHE
MHIEEDAGKN THGANGYSYV DLNRQGVPLL EVVSEPDMED PEEAYAYLTK LRQIVQFTGA
SDVKMEEGSM RVDTNISIRP AGQEKLGTKV EMKNLNSFDH VRRSLAYEEK RQQQVLLSGG
RVQLSTRRFD EATGKTVLER VKEGDADYRY FPEPDIAPYH IKQSWIDEIA ESLPESPFER
RKRYVKEYGI KEYDADVILQ TKESSDFYDA AVAAGADPTL AANWLNTQVN GYLNENQVGI
ADIKLTPEHL AEMIKMIKDG TISSKIAKKV FKESIENGTD PKKYVEDKGM VQLSDVSVLG
PMVTKVVDDN PQSVEDFKNG KDRAIGFLVG QIMKQTRGKA NPKVVNQLLN KELQSR
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