Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1436 |
Symbol | |
ID | 4439347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1427093 |
End bp | 1427740 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639673268 |
Product | EMAP domain-containing protein |
Protein accession | YP_815235 |
Protein GI | 116630063 |
COG category | [R] General function prediction only |
COG ID | [COG0073] EMAP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.180074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTTT CTACCAATAA AACAAGTTAC CCTGATACTT TAATTGTGAT TCTTGACCAA GATAAGGGTC GTAGTAAGTT CACAGAAAAG GATCAAGTTA CGCGAGTTGA AAATGAAGAC GGTGAAGTTA TTGGATTTAA TTTCTTTAAC GTAAGTAGCT TTTTAGATTA TGATAAGTTA CCAAACGGTG AAGTTAAACC AACACAAGAT TTAGTTGATG CTTTGAATAA AAAAATAGCT GAAGCTGGTT TTGATACTAA ACTAGAAATT GGCAAGCCAA CTCTGGTTTA TGGCTATGTT AAGACTTGTG AACCACATCC AGATTCTGAC CACTTGCATG TAACTACTGT TGACGTAGGA AATGGTGAAG AACACCAAAT TGTTTGTGGT GCACCAAATA TTGCTCAAGG TCAAAAGGTA GTCGTTGCAC TTCCTGGTAC TTTGATGCCA AATGGTCAAC AAATTTGGCC AGGCGAACTT CGTGGTGTTG ATTCATACGG TATGATTTGT TCGGCACGTG AATTAGGATT AGCTCATGCT CCTCAAAAGC GTGGTATTAT GGTTGTTCCT GATGACTTTA ATGCTGGAGA CGAGTTTGAG CCAACTAAGT GCGATGAATT ATTAGCTAGT GGCCAAATTA GTTTGTAA
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Protein sequence | MIVSTNKTSY PDTLIVILDQ DKGRSKFTEK DQVTRVENED GEVIGFNFFN VSSFLDYDKL PNGEVKPTQD LVDALNKKIA EAGFDTKLEI GKPTLVYGYV KTCEPHPDSD HLHVTTVDVG NGEEHQIVCG APNIAQGQKV VVALPGTLMP NGQQIWPGEL RGVDSYGMIC SARELGLAHA PQKRGIMVVP DDFNAGDEFE PTKCDELLAS GQISL
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