| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1380 |
|---|
| Symbol | miaA |
|---|
| ID | 4439396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1377239 |
|---|
| End bp | 1378165 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639673213 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_815180 |
|---|
| Protein GI | 116630008 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000287928 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000000000000414163 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTTTATGC AAAAAATTAT TGTCCTGATT GGACCTACTG GAATTGGAAA AACTGAATTA
GCATTGAAAC TTGCTCCGAA AATTAATGCA GAAATCATTT CTGGAGATTC AATGCAGATT
TATCAAGAAG TAAGTATCGG TACTGCTAAG CCGACGGCTG AAGAACTTAG ACAAGTAAAA
CATTATTTGG TTAATCAGCG CTCTATTTTT GATGAATATT CTGTTAAAGA TTTTGTTGCT
GAAGGTAAAA AAGCTGTTAA TCAAATTGCA GCTAAGGGAT CTATTCCACT AGTCGTTGGC
GGAACTGGTT TTTATATTAA TGCCTTGGTA AACAAGCTTC AATTAGGTGA GCCTGGTGAT
TATCAAACAA GTGTGGATTC TAAGTGGGAA AAATATTTAA AAGACAATGG TGCAGAAAAA
TTATGGCAAC TTCTTGATGA AAAGGATCCT GTTGCTGCTA AAAAAATAGC TCCACAAAAT
AGTCGTCGAA CTCTTAGAGC ATTAACTGTA ATTAGTCGAA CAGGTAAGTT ATTTAGTCAG
CAGCAAGCCC AAATTTCTCC TAGATACGAT GCCTTGATTA TTGGTTTAAA TAGTAATCGA
GAAGAAGTCT ATCAGCGAAT CAATAAACGT GTCGATAAAA TGATGAATGC TGGCTTACTT
AAAGAAGCAA AATTTGTTTA TGACAACCGT GCTCGTGAGC ATCAAGCAAT TCAAGCGATC
GGCTATAAAG AGTTTTTTCC ATATTTCTCG GGTGAAAAAA CGCTTGATGA ATGTGTAAAT
AAACTAAAAC AAGCATCACG AAAGTATGCT AAACGTCAGC TGACATATTT TAAGCATCAA
TTATCTGTTG TCTGGTTAGA TCCTTTACAA GATAAAGAGG TGTCAGAGAG AGCTTTAAAT
GAAATAAAAA GTTTTTTAAA TAAATAA
|
|---|
| Protein sequence | MFMQKIIVLI GPTGIGKTEL ALKLAPKINA EIISGDSMQI YQEVSIGTAK PTAEELRQVK
HYLVNQRSIF DEYSVKDFVA EGKKAVNQIA AKGSIPLVVG GTGFYINALV NKLQLGEPGD
YQTSVDSKWE KYLKDNGAEK LWQLLDEKDP VAAKKIAPQN SRRTLRALTV ISRTGKLFSQ
QQAQISPRYD ALIIGLNSNR EEVYQRINKR VDKMMNAGLL KEAKFVYDNR AREHQAIQAI
GYKEFFPYFS GEKTLDECVN KLKQASRKYA KRQLTYFKHQ LSVVWLDPLQ DKEVSERALN
EIKSFLNK
|
|---|
| |