| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1341 |
|---|
| Symbol | |
|---|
| ID | 4439462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1337988 |
|---|
| End bp | 1338716 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639673174 |
|---|
| Product | 3-oxoacyl-acyl carrier protein reductase |
|---|
| Protein accession | YP_815141 |
|---|
| Protein GI | 116629969 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000246645 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 130 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG CAATAGTTTT TGGCGCAACA GGAGGAATTG GCAAGGCCAT TGCAGCCCAC
CTTGCTGCAA AAGGTTGGTC TTTATACATC CACTTTAATC ATAGCAGTCA AGAAGCTGAA
AAAATGGTAG CAGAATTTAT TGATAAGTAT CCAAATCAAG AATTTTTTCC TTTAAAGTTA
GATTTCTTGG CTGAAGATAA AGTAATTAAA ACTACCATTG CAAGCCTTTT ACCAATAAGT
GCTGCTATTT TTACTCAAGG AATAACTAAT TACCAATTCC TTGGTAGTCA AGAATTAACT
CAAATAGAAA AAATTATGCA AATTAATTTA TTAGCGCCAA TAAAGATCAC TTCTCTTTTA
GAATCACAGC TTTTAAAAAG AAAACATGGA CGTATCATCT TTATTGGTTC GGTATATGGT
GGCCAAGCAA GTGCGTTAGA GAGCGTGTAT AGTGCCAGCA AGGGTGGTTT ATCTAGCTTT
GCGCAAGGAT ATGCACGAGA AGTTGCATCA GCTCATTTAA CAGTAAATGT AATTGCTCCT
GGGGCAGTTG ATACACCAAT GAACGCAATT TTTGACGCAG AAACTTTAAA CGAAGTAAAA
AATGAAATTC CTGCCGGGAG ATTAGCTAAA CCTAGAGATA TCGTCTTTTG GGTAGAAAGC
TTACTTGATG AACGGTCAGA TTATTTGACT GGTCAAACTA TTTATGTTGA TGGTGGCTGG
CTTGTTTAA
|
|---|
| Protein sequence | MKRAIVFGAT GGIGKAIAAH LAAKGWSLYI HFNHSSQEAE KMVAEFIDKY PNQEFFPLKL
DFLAEDKVIK TTIASLLPIS AAIFTQGITN YQFLGSQELT QIEKIMQINL LAPIKITSLL
ESQLLKRKHG RIIFIGSVYG GQASALESVY SASKGGLSSF AQGYAREVAS AHLTVNVIAP
GAVDTPMNAI FDAETLNEVK NEIPAGRLAK PRDIVFWVES LLDERSDYLT GQTIYVDGGW
LV
|
|---|
| |