| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1336 |
|---|
| Symbol | |
|---|
| ID | 4439457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1332094 |
|---|
| End bp | 1333236 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639673169 |
|---|
| Product | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| Protein accession | YP_815136 |
|---|
| Protein GI | 116629964 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000828029 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 144 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAAA CAATTGTAAA AATATTCTTA TTAGTAATTA TTACTGCTGC TATAACTCCT
TTTATTAGAA AATTAGCTTT CGTATTAGGT GCAGTTGATA ATCCAAATGC TCGCCGAATT
AATAAGAAGC CAATGCCAAC TATTGGCGGG TTAGCGATCT TTGTAGCTTT TAATATTGGA
GAGTTCGTTT TGCTGAGGAA AGATTTCCCC ACTCACGAGC TTTTTTCCGT ATTACTAGCA
TCTAGTGTCA TCATTTTGAC TGGATTAATT GACGATATTT TAGAACTAAA ACCCAGACAA
AAAATGTTTG GAATCTTTAT AGCGTCCCTA GTTGTGTACT TTTTAGCTGG AATTAAAGTT
AGAGAATTAA GCTTGCCATT ATTGGGTCAT CTTCAACTAG GTTGGTGGAG TTTTCCCCTG
ACGATTTTTT GGATTTTAGC TTTAACTAAT GCTGTTAATC TAATTGATGG TCTCGATGGC
CTAGCTACTG GCGTTACTTT GATTTCTCTT GTAACGATGG GAATTGTAGG CTTTTTCTTT
CTAAAAAGTT GGCAGCACTA TGTTCCAATT ATGTGTATTA TGTTAGCAGC TTGCTTATTA
GGATTTCTAC CATATAATTT CCACCCTGCT AAGATTTTTT TAGGAGATAC AGGTGCGCTG
TATATTGGTT TTATGATTTC GGTCTTTTCT TTAAAAGGAC TAAAGAATGT AACTTTTGTA
TCGTTATTAG TGCCAATTCT TATTTTAGGT GTTCCAATTA CTGATACAGT GTATGCAATG
ATCCGCAGAA AATTGAATAA GAAGAATATT TCTCAGGCTG ATAAGCACCA TTTGCATCAT
CAGTTAATGC GAATGGGATT GACACACCGT CAAACAGTCT TAGCCATTTA TGGGATTTCA
CTTATTTTTT CTTTTGTGTC ACTTCTTTCA TTAGTTTCAC CTAGATGGGG AATTTGGTTA
TTAATTCTAG GCTTATTGTT TGCAGTTGAA CTTTTTGTTG AGACTATTGG ATTATTGGGT
GAAAAATATA AGCCGCTTCT GCATTTCTTG CAACGAACTA TTAATAAAAT GGAACGTGCG
GACCCTGAAG TAAAGGTTAG ACGATTAAAC AGAAAGAATA CAGATAAAAA AGATTTACGT
TGA
|
|---|
| Protein sequence | MFQTIVKIFL LVIITAAITP FIRKLAFVLG AVDNPNARRI NKKPMPTIGG LAIFVAFNIG
EFVLLRKDFP THELFSVLLA SSVIILTGLI DDILELKPRQ KMFGIFIASL VVYFLAGIKV
RELSLPLLGH LQLGWWSFPL TIFWILALTN AVNLIDGLDG LATGVTLISL VTMGIVGFFF
LKSWQHYVPI MCIMLAACLL GFLPYNFHPA KIFLGDTGAL YIGFMISVFS LKGLKNVTFV
SLLVPILILG VPITDTVYAM IRRKLNKKNI SQADKHHLHH QLMRMGLTHR QTVLAIYGIS
LIFSFVSLLS LVSPRWGIWL LILGLLFAVE LFVETIGLLG EKYKPLLHFL QRTINKMERA
DPEVKVRRLN RKNTDKKDLR
|
|---|
| |