Gene LGAS_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1314 
Symbol 
ID4439469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1305372 
End bp1306469 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content38% 
IMG OID639673147 
Producthypothetical protein 
Protein accessionYP_815114 
Protein GI116629942 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0189864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones128 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATATTTC CCATCGAGAA ATTAGTCGTT ATATTGGACA ATAAAGGAGA TTGTTGGGAG 
ATGGCGTACG GAGAAAATAA AATTGTACGT GTCATTCGCG GACGTCGCCC TAAGATTGTT
GTTATTGGTG GTGGAACAGG GTTACCTGTT ATTTTGAATG CTTTAAAAGA ACAAAATGCC
GATATAACAG CTATTGTAAC TGTGGCAGAC GATGGTGGAT CATCAGGTGC AATTAGAGAT
TATATTAATG TGGTGCCACC AGGCGACATT AGAAATGTGT TAGTTTCCTT ATCTGACTTA
CCACAGGAAG AAAAAGATAT TTTTCAATAT CGCTTTAATT CGTCTGACTC ATTTTTTGCA
GGGCATGCGA TTGGAAATTT AATTATTGCT GCTTTGGATG AAATGCAGGG GAATATTTTT
GATGCTGTTC AATCATTATC AAGAATGATG CGAATTGATG GTCGAATTTT CCCTGCTTCA
AATGAGCCTT TAACTTTAAA TGCAGAATTT ATTGACGGAA CAACTGAAGC TGGTGAAACA
GAAATCACTT CAAAGGATAA GCGCATAAAA CGTGTATGGG TAACTGATAC CGATTCTGAC
GATGAGCCGA AAGCAGTTTT GCCAGTTTTA GCCGCAATTA TGCAAGCGGA CGCAGTAGTT
TTAGGGCCAG GTAGCTTATT TACTTCAATT TTACCTAATT TGATGATTTC TAATTTAGGG
GATGCTGTGA GACAAACTAA GGCTGAAGTG ATTTATATCT GTAATATCAT GACGCAACAA
GGTGAAACAG ATCATTTCAC GGCAGCGGAA CACGTTCAAG TTATTAATGA TCATTTAGGT
GGTCACTATA TTAATACGGC CTTGGTTAAT GGGGCTAAAA TTGACATGAG TAAGTTTAAT
CCAGCCGATT ATGATGCCTA TCTTGAACCG GTAAGAAATG ATTTCGCTGG ATTACGGGCT
CAAGATTGCC GCGTAATTAC AGCTGACTTT ATTGATCAGC ATAGTGGATT AGTTTTTCAT
GATGGTAAAA AAGTAGCCGA TGAAATTTTG AATTTGGCTT TTGAAGCATA TTGCCGCAGA
AAAAAGGAAC AGGATTAG
 
Protein sequence
MIFPIEKLVV ILDNKGDCWE MAYGENKIVR VIRGRRPKIV VIGGGTGLPV ILNALKEQNA 
DITAIVTVAD DGGSSGAIRD YINVVPPGDI RNVLVSLSDL PQEEKDIFQY RFNSSDSFFA
GHAIGNLIIA ALDEMQGNIF DAVQSLSRMM RIDGRIFPAS NEPLTLNAEF IDGTTEAGET
EITSKDKRIK RVWVTDTDSD DEPKAVLPVL AAIMQADAVV LGPGSLFTSI LPNLMISNLG
DAVRQTKAEV IYICNIMTQQ GETDHFTAAE HVQVINDHLG GHYINTALVN GAKIDMSKFN
PADYDAYLEP VRNDFAGLRA QDCRVITADF IDQHSGLVFH DGKKVADEIL NLAFEAYCRR
KKEQD