Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1314 |
Symbol | |
ID | 4439469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1305372 |
End bp | 1306469 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639673147 |
Product | hypothetical protein |
Protein accession | YP_815114 |
Protein GI | 116629942 |
COG category | [S] Function unknown |
COG ID | [COG0391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0189864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 128 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATATTTC CCATCGAGAA ATTAGTCGTT ATATTGGACA ATAAAGGAGA TTGTTGGGAG ATGGCGTACG GAGAAAATAA AATTGTACGT GTCATTCGCG GACGTCGCCC TAAGATTGTT GTTATTGGTG GTGGAACAGG GTTACCTGTT ATTTTGAATG CTTTAAAAGA ACAAAATGCC GATATAACAG CTATTGTAAC TGTGGCAGAC GATGGTGGAT CATCAGGTGC AATTAGAGAT TATATTAATG TGGTGCCACC AGGCGACATT AGAAATGTGT TAGTTTCCTT ATCTGACTTA CCACAGGAAG AAAAAGATAT TTTTCAATAT CGCTTTAATT CGTCTGACTC ATTTTTTGCA GGGCATGCGA TTGGAAATTT AATTATTGCT GCTTTGGATG AAATGCAGGG GAATATTTTT GATGCTGTTC AATCATTATC AAGAATGATG CGAATTGATG GTCGAATTTT CCCTGCTTCA AATGAGCCTT TAACTTTAAA TGCAGAATTT ATTGACGGAA CAACTGAAGC TGGTGAAACA GAAATCACTT CAAAGGATAA GCGCATAAAA CGTGTATGGG TAACTGATAC CGATTCTGAC GATGAGCCGA AAGCAGTTTT GCCAGTTTTA GCCGCAATTA TGCAAGCGGA CGCAGTAGTT TTAGGGCCAG GTAGCTTATT TACTTCAATT TTACCTAATT TGATGATTTC TAATTTAGGG GATGCTGTGA GACAAACTAA GGCTGAAGTG ATTTATATCT GTAATATCAT GACGCAACAA GGTGAAACAG ATCATTTCAC GGCAGCGGAA CACGTTCAAG TTATTAATGA TCATTTAGGT GGTCACTATA TTAATACGGC CTTGGTTAAT GGGGCTAAAA TTGACATGAG TAAGTTTAAT CCAGCCGATT ATGATGCCTA TCTTGAACCG GTAAGAAATG ATTTCGCTGG ATTACGGGCT CAAGATTGCC GCGTAATTAC AGCTGACTTT ATTGATCAGC ATAGTGGATT AGTTTTTCAT GATGGTAAAA AAGTAGCCGA TGAAATTTTG AATTTGGCTT TTGAAGCATA TTGCCGCAGA AAAAAGGAAC AGGATTAG
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Protein sequence | MIFPIEKLVV ILDNKGDCWE MAYGENKIVR VIRGRRPKIV VIGGGTGLPV ILNALKEQNA DITAIVTVAD DGGSSGAIRD YINVVPPGDI RNVLVSLSDL PQEEKDIFQY RFNSSDSFFA GHAIGNLIIA ALDEMQGNIF DAVQSLSRMM RIDGRIFPAS NEPLTLNAEF IDGTTEAGET EITSKDKRIK RVWVTDTDSD DEPKAVLPVL AAIMQADAVV LGPGSLFTSI LPNLMISNLG DAVRQTKAEV IYICNIMTQQ GETDHFTAAE HVQVINDHLG GHYINTALVN GAKIDMSKFN PADYDAYLEP VRNDFAGLRA QDCRVITADF IDQHSGLVFH DGKKVADEIL NLAFEAYCRR KKEQD
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