Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1288 |
Symbol | |
ID | 4439512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1281637 |
End bp | 1282485 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673121 |
Product | hypothetical protein |
Protein accession | YP_815089 |
Protein GI | 116629917 |
COG category | [S] Function unknown |
COG ID | [COG1624] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00159] conserved hypothetical protein TIGR00159 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000108276 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATTTA ACATCGAGCA AATATTTACT TGGCAAAATT TAATGAATAT TATTGATATT CTGATTGTTT GGTATATTAT TTATCGCTTA ATTATGTTGG TAAGAGGAAC CAAGGCTGTT CAATTAGTTA AAGGAATATC ACTAATTATC ATAGTTAGAA TTATAGCCGG TTTATTGCAC TTACATACAC TAACGTATTT CGTTGATCAA ATTCTTTCAT GGTCTGTAAT TGGAATAATC GTTATTTTTC AACCAGAAAT TAGACGTGGA CTTGAACATT TAGGAAGATC GCCAATTTTT GGTGGCACAA CTATGACTGA AAAACAGGCC GCTGAAAAAA TGATTGGAGA ACTAGATAAG GCGATTCAAT ATATGTCCAA AAGAAGAATC GGTGCTTTAA TTACAATTCA GCAAAATACT GGTTTAGAGG ATTATATTGA AACAGGTATT CCAATTGATG CAGATATTAC TGGCGAGTTA TTAATCAACA TCTTTATTCC TAACACTCCA TTGCATGATG GTGCAGTAAT TATTAGAAAT AATCGGATTG CAGTTGCTGC TGCGTATTTA CCACTTTCAG ATAATAGTAT GATTCCTAAA AAACTTGGAA CTCGTCACCG GGCTGCGGTA GGTATTTCAG AAGTTACTGA TGCGATTACA ATTGTTGTAT CTGAAGAAAC TGGTGGGGTA ACAATTACTC GTAATAGCCA GTTTATGCTT GATTTGACTA GAGAAGAGTA TTTGAAGTAC TTAAATGCTC AACTAGTTCC AAAGGAAGAA GAAGAAAAGC CGAAATGGTA TCAACGAATT GTAAACCATG TTTGGAATTG GGGGTCAAAT AAAAAATGA
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Protein sequence | MKFNIEQIFT WQNLMNIIDI LIVWYIIYRL IMLVRGTKAV QLVKGISLII IVRIIAGLLH LHTLTYFVDQ ILSWSVIGII VIFQPEIRRG LEHLGRSPIF GGTTMTEKQA AEKMIGELDK AIQYMSKRRI GALITIQQNT GLEDYIETGI PIDADITGEL LINIFIPNTP LHDGAVIIRN NRIAVAAAYL PLSDNSMIPK KLGTRHRAAV GISEVTDAIT IVVSEETGGV TITRNSQFML DLTREEYLKY LNAQLVPKEE EEKPKWYQRI VNHVWNWGSN KK
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