| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1205 |
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| Symbol | murD |
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| ID | 4439598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1205643 |
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| End bp | 1207025 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639673042 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_815012 |
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| Protein GI | 116629840 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0176013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 108 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TAAAAACATA TGAAAATAAA AATATTTTAA TTTTGGGTTT AGGAAAGAGT
GGCTTTTCAG TAGCTAAACT TCTTTTAAAG TTAGGCGCTA AACTTACATT AAATGATAAA
AAAGACTTAT CTAATGATGA CCGCGCAGCT GAATTAGATA AATTAGGTGT TCGAATTATT
TCAGGATATC ATCCAGTAGA GATTTTTGAT AAGGAAAAAT TTGACTATCT TGTTAAAAAC
CCCGGTATTC CTTATGAAAA TCCAATGGTT GAAAAGGCGC TAAAGCTAAA CATTCCAGTT
ATTACTGAAC CAGAGATTGC ACTTAATGTA AGTGAAGCTC CATATGTTTG TGTTACTGGT
TCAAATGGTA AGACAACTAC TGTCATGCTA ACGCAAAGAA TTATGGATCA TCATTTATCT
AAAAATGGTG GTCATGCTTA TGCAGTTGGT AATATTGGTG TGCCAATTTC AGAAGTCGTT
GAAAAAGCTA CAGATAAAGA TTTACTTGTA GTAGAAATGT CTAGCTTCCA ATTGCTTGGC
GTAACAGATA TTAAGCCTAA GGTAGCGGCA ATTGTAGATA TCTATAATAA TGTTCACTTA
GATTACCATA AGACCTTTGA TAATTACGTT GAAGCTAAAC TAAGAATTAC TCAATCACAA
GATCAAAATG ATTATTTTAT TGCTAACTTT GATCAAAAGA ATATTTTAGA CAGAGAATTA
AAGAAAACTA AAGCTAAGGT TCAAACATTT TCTGAAACAG ATAAGACAGC AGATTATTTT
ATTGGTGATG AATATCTTGA AAGTAAAGAT GATCATCAAA TTATGAAGAT CAGCGATATT
AAGATCCCAG GTATTCATAA CCAACAAAAT TGCTTAGTAG CAATTGCTAT TTCTAAATTA
ATGGGCGCAG ACGATAGCGA TATTCAATAC GCATTAAGTA CTTTTACTGG TGCTACACAC
CGTCTGCAAT ATGTGATGAC TTACAATGAT CGCAAGATTT ATAATGATTC AAAATCAACC
AATATTGAAG CAGCTACAGT AGCTATTCCT TCTTTTAAAG AGCCAGAAGT TTTAATTGCT
GGTGGACTAG ATCGCGGTTT TATGTTTGAT TCTCTTGTTC CGCTATTTAA AAAGTATGTA
AAATCAATTG TACTTTATGG TGAAACTAAA TATCTTTTAG CTGATGCCGC TCGTAAAGCT
GGTATTAAAG ATATTGTTAT TGTTAATACT TTACAAGAAG CTGTTCCACG TGCATATGAA
CTGAGTGAAG CAGGAGATGT TATTTTGTTC TCACCAGCAT GTGCTTCTTG GGATCAATTT
AATACTTTTG AAGAACGTGG AGACTTTTTT GTAAAATTTA TTAAGGAATT AAAGACTAAG
TAA
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| Protein sequence | MKKIKTYENK NILILGLGKS GFSVAKLLLK LGAKLTLNDK KDLSNDDRAA ELDKLGVRII
SGYHPVEIFD KEKFDYLVKN PGIPYENPMV EKALKLNIPV ITEPEIALNV SEAPYVCVTG
SNGKTTTVML TQRIMDHHLS KNGGHAYAVG NIGVPISEVV EKATDKDLLV VEMSSFQLLG
VTDIKPKVAA IVDIYNNVHL DYHKTFDNYV EAKLRITQSQ DQNDYFIANF DQKNILDREL
KKTKAKVQTF SETDKTADYF IGDEYLESKD DHQIMKISDI KIPGIHNQQN CLVAIAISKL
MGADDSDIQY ALSTFTGATH RLQYVMTYND RKIYNDSKST NIEAATVAIP SFKEPEVLIA
GGLDRGFMFD SLVPLFKKYV KSIVLYGETK YLLADAARKA GIKDIVIVNT LQEAVPRAYE
LSEAGDVILF SPACASWDQF NTFEERGDFF VKFIKELKTK
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