Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1186 |
Symbol | |
ID | 4439614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1187063 |
End bp | 1189441 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639673023 |
Product | exonuclease V subunit alpha |
Protein accession | YP_814993 |
Protein GI | 116629821 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000641615 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.675634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA CTAGTTTTAC TGGACGAATT AACGGAATTG TTTTTGAAAA TAATCAAGAT CTTTTCAAAA TTATTGATGT AGACTTGATT AGTAAATTAG CAGATTATGA TCGTGACAAT ATCCGAGTAA CTGGTAATTT TGGTGATATT CAGATTGGCT CGACTTACAA GTTTGTTGGT CAAGTTGTTG TACATGAAAA GTTTGGTAAA CAATTTCGCG TTAGTTCATA TGAACCAGTT TTACCACATG AAGAGGGAAG TTTAGCGAAA TATCTAAGTT CTGATAAATT CCCCGGTATT GGTAAAAAAG CCGCTGAGAA GATTATTGCT AGTTTAGGTA CTAATGCCTT GGATCTGATT AAGTCCAACC CAACTGAAAT TGAAAACCTT GATTTAACGC CAAAGCAAAA GAATAGTTTA CTATCTGGGA TTAATCAAAT GGACTCTTTC TCAGAAATTG TTATTAAGCT AGCTAAATAC GGAATTAATA AAAAAACTGC TGGAAATATT TATAAAGCCT ATCATGGAGA TTCTCTAAAA AAACTTGAAG AGGATCCTTA TCAAGCAGTT GGTGAAATTA GAGGCTTCGG CTTTAGGACA GCAGATAATA TTGGTCAAGC ACTTGGAATT GAATTAAATG ATCCAAAAAG AGTTAGAGGT GCAATTTTAA GTATTTTGCA GAGTGCTCTA AGTACGCTGG GAGACACTTA TGTGGCACTA GATGATTTAC TAACTCAGGC ATATGATTTG GTTCAAGCTA GTTCTTATGA CGACTTGGCA AATAGTGTGA ATGAGCTTCA GCGTCAAGGT AAGGTGGTTG TGTCAGGCGA CAAAGCAGCT TTACAGGGAA TTTTTCAAAC TGAACTTGAT ATTTCAAATG AGTTAAAGCG TTTAGTCAAA AATCGGGTAG AAAAAGAAAA ATTCAGTGAT GAAAAAATTG AGCATGCAAT TAATCATGCT GAAGAAGAAC TTGAAATTAA GTATGACGAA ACGCAAAAAA AAGCTATTAA AAATGCTTTA AATAATCCAA TTTCCATTCT TACTGGTGGA CCAGGTACTG GTAAGACAAC AATTATTAAT GGAATTTTGA TGTGTTTAAA GGAACTTGCA GAGATTCCAA GTGGAGCCTT GTATAGTGAA GATCCGCCAT TTTTGTTAGC TGCTCCAACA GGACGGGCTG CTAAGAGAAT GAGCGAGATT ACCGATATTT CTGCTAAAAC TATTCACCGT TTGTTGGGGC TAGGTATTGG CGAAAATGAT GCTACCGATG TTAATGAATT AAATGGTGAA ATTTTAATTA TTGATGAAAT GTCGATGGTT GATATGTTTC TGTTCAAGCA GTTGTTATCG GGGATTAATT CGACAAAAAG AATTGTATTT GTTGGTGACC AAGACCAGCT ACCTTCGGTT GGAGCGGGAA ATATTTTTAG TGATCTAATT AAGTCAGAAG CGTTTCCAAC AACTAGACTT CAGGTAATTC ATCGACAAGG GGAAGATTCA TCAATTATCA AGCTAGCTCA TGCAATTAAT GAAGAAGATG CTGAACAAAT AATTTTTAAT AAAACTAAGA ACTATTCCTT TATTCCGTGT CAGCCAAGGT TAGTTGGAGA CGCAATTGAT CAAATTGTTA ATTTAGCTAT TAAGCGTGGT TTTGAAAAGG ATGACGTTCA GGTCCTTGGA GCTATGTATA ATGGTCAGGG CGGGATTACC CACTTGAATG ACATCTTGCA AGATGTGATG AATCCAATGT CTTCTAAAAC CAAGGTAATT GAAGCACATA ATGAAAGTTT TAGAATCGGT GATCGGATTT TACAATTGCA AAATAATCCT GAAAAGGATA TTTATAATGG TCAAATTGGC AAAATTATTG GCCTCAATCC TGATGATAAG GCTAAAATAT TAATTGCTGA TTTTGATGGC CGAGAAATAG AGTTTAGCGT TAAAGATTTA AATGATATTA CTCGTGCTTA TGCAATTACG ATTCATAAAT CACAGGGATC AGAATTTCCG TTAGTTATTT TGAATCTTAC TATGCAAAAT TATATGATGT TGAGACGTAA TTTGCTCTAT ACAGCAATTA CTCGAGCTGA GAAGAATCTC GTTATGGTAG GAGAAAAAAA GGCCTATCTT ATGGCTTTAC GTACACCCGG AAATGATCGG AAAACGGATT TAGCTTCTAA GATCAGACAT GAATTGGGTC TAAAAGAAGT AGTTGAGCAT GATTCTAACG AAAATATTAA ACAAGAACAG GCTCAAACTG AAGTTAAAGA AGAGGTAACT GAACCTAAAG ATTATATCTT AACTCCTGAT TTAATTTACT CTGGTAAAAT CAACCCAATG ATTGGGATGG AAAAGATAGA ATTAAAAGCA AGAGATTAG
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Protein sequence | MAETSFTGRI NGIVFENNQD LFKIIDVDLI SKLADYDRDN IRVTGNFGDI QIGSTYKFVG QVVVHEKFGK QFRVSSYEPV LPHEEGSLAK YLSSDKFPGI GKKAAEKIIA SLGTNALDLI KSNPTEIENL DLTPKQKNSL LSGINQMDSF SEIVIKLAKY GINKKTAGNI YKAYHGDSLK KLEEDPYQAV GEIRGFGFRT ADNIGQALGI ELNDPKRVRG AILSILQSAL STLGDTYVAL DDLLTQAYDL VQASSYDDLA NSVNELQRQG KVVVSGDKAA LQGIFQTELD ISNELKRLVK NRVEKEKFSD EKIEHAINHA EEELEIKYDE TQKKAIKNAL NNPISILTGG PGTGKTTIIN GILMCLKELA EIPSGALYSE DPPFLLAAPT GRAAKRMSEI TDISAKTIHR LLGLGIGEND ATDVNELNGE ILIIDEMSMV DMFLFKQLLS GINSTKRIVF VGDQDQLPSV GAGNIFSDLI KSEAFPTTRL QVIHRQGEDS SIIKLAHAIN EEDAEQIIFN KTKNYSFIPC QPRLVGDAID QIVNLAIKRG FEKDDVQVLG AMYNGQGGIT HLNDILQDVM NPMSSKTKVI EAHNESFRIG DRILQLQNNP EKDIYNGQIG KIIGLNPDDK AKILIADFDG REIEFSVKDL NDITRAYAIT IHKSQGSEFP LVILNLTMQN YMMLRRNLLY TAITRAEKNL VMVGEKKAYL MALRTPGNDR KTDLASKIRH ELGLKEVVEH DSNENIKQEQ AQTEVKEEVT EPKDYILTPD LIYSGKINPM IGMEKIELKA RD
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