| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1157 |
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| Symbol | |
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| ID | 4439620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1158285 |
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| End bp | 1159289 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639672994 |
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| Product | transcriptional regulator |
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| Protein accession | YP_814964 |
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| Protein GI | 116629792 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000266671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 6.72858e-19 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCATA ATAATAGTGA TAATCAAATA AAGCATCGCT CACATCATCA CCGTCATCAT
CGACGTAAAA AGTTTTGGCG TATCTTTTGG ATTGTATTAG GTGTCTTCCT TGTGGTAGAT
ATCATTGCGG TTATTATCGC TTGGCACAAT ATCCATGTTG CCACTAACAA TATGTATAAT
CCGATGAGTA ACGAGATTAG TGATCGGAAG GTTAGCGACA CTCTTAAGGA CAAAAAGCCA
ATGAGCTTGC TTTTGCTGGG AACAGATACA GGTGAATTTG GTCGTTCTTA CAAGGGTAGA
ACTGATACCA TTATGATGAT GGTTATTAAC CCTAAGACTA ATAAGTCAAC AGTTGTTAGC
TTACCTCGAG ACATGAAGGT TAACTTGCCG GATTATCCAG ACTATTCACC AGCCAAGATT
AATTCAGCTT ATACTTATGG CGGTGTAGAT GAGACTGTTA AGACGATCAA GAAGTACTTT
AATATTCCAA CTGATGCTTA TGTAATGGTA AACATGGGCG GATTAGAGAA GGCTATTGAT
CAAGTTGGAG GAGTGACAGT CAAGTCGCCA TTAACGTTTG ATTATGAAGG CTATCATTTT
ACTAAGGGCG CAACTTATCA CATGAATGGG AAGAAGGCTT TGGCATTTAG TAGAATGCGT
TATGACGATC CTCGAGGAGA TTATGGGCGT CAAGAGAGAC AAAGGCTTGT AATTATGGCA
TTATTAAAGA GTTCCATTTC TTACAAGACA GTTGTAAACC AACCTTTCTT GAACTCAATC
TCTAAGCAAA CCATGACGAA TTTAACTTTT GACAATATGA TTGCTTTAGC TCAGAATTAT
CGTCATGCAA CTGATAATGT AACTACTGAT TATGCTCATG GACAAGGCGA CTGGGAGAAT
GGCGTTGCCT ATGAATCAGT CAGTCGATCA GAGTGTCAAA GAATTAGTAA TAAGTTACGT
GCTGCCTTAG GGCTTAAGCC GGAAACCTTG AAGACAGGAG AATAG
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| Protein sequence | MDHNNSDNQI KHRSHHHRHH RRKKFWRIFW IVLGVFLVVD IIAVIIAWHN IHVATNNMYN
PMSNEISDRK VSDTLKDKKP MSLLLLGTDT GEFGRSYKGR TDTIMMMVIN PKTNKSTVVS
LPRDMKVNLP DYPDYSPAKI NSAYTYGGVD ETVKTIKKYF NIPTDAYVMV NMGGLEKAID
QVGGVTVKSP LTFDYEGYHF TKGATYHMNG KKALAFSRMR YDDPRGDYGR QERQRLVIMA
LLKSSISYKT VVNQPFLNSI SKQTMTNLTF DNMIALAQNY RHATDNVTTD YAHGQGDWEN
GVAYESVSRS ECQRISNKLR AALGLKPETL KTGE
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