| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1127 |
|---|
| Symbol | |
|---|
| ID | 4439660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1131398 |
|---|
| End bp | 1131853 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672967 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_814937 |
|---|
| Protein GI | 116629765 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.103826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA AAGAAGGTGA GAAAATGTTT AATAAAGAAG AAGCACTTAA AAAATTAAAC
TCAGAGCAAT ATGAAGTTAC TCAACATGCT GCGACTGAAT ATCCTTTTAC TGGAAAGTAT
GACAAATTTA ATCAAAAGGG AATTTATGTT GATGTGGTAT CTGGGGAGCC CTTATTTTCT
AGTGAAGATA AGTATGATGC TGGTTGTGGT TGGCCGAGTT TTACGAAACC AATTGAAAAA
CTTGTTTATC ATCGGGATCA ATCGCATGGA ATGGAACGAA CTGAAGTAAA AAGTCCGCTA
GCTGACTCTC ATTTAGGGCA TGTTTTTACA GATGGTCCCG TTGATCAAGG CGGCTTGAGA
TATTGTATTA ATTCTGCTGC GTTAAAGTTC ATTCCATATG ATAAGCTAGA GGAGGAAGGT
TATGAAAATT ATCAGAAGTT ATTCAAAGGA CGATAG
|
|---|
| Protein sequence | MFKKEGEKMF NKEEALKKLN SEQYEVTQHA ATEYPFTGKY DKFNQKGIYV DVVSGEPLFS
SEDKYDAGCG WPSFTKPIEK LVYHRDQSHG MERTEVKSPL ADSHLGHVFT DGPVDQGGLR
YCINSAALKF IPYDKLEEEG YENYQKLFKG R
|
|---|
| |