Gene LGAS_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1124 
Symbol 
ID4439657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1128955 
End bp1129833 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content37% 
IMG OID639672964 
Producthypothetical protein 
Protein accessionYP_814934 
Protein GI116629762 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000105294 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAT TAGAAAAGCT GTCTCGTAGA CACTATCTAA TTTCAAAATT ATCTGCGGCA 
TTCCTCTATG CTTTGGCGGT TGCTGTGGCC CTGAACTTTT TCTGGGGTCC TGGTAAGATC
TACGCCTCTG GTATTACGGG ATTTGCACAG ATTATTCAAT CAGTGTCTGA ACGATTCATG
CCATTTACCT TATCGACCTC AGTGATGTAC TTTGTTTTAA ACATTCCGCT TTTTATCTTG
GGATGGTGTA AAATAGGACA TCGCTTTACA ATTTTTACCA TTATTGCCGT ATTACTTGGA
TCAATCATGA TGCGAGTAAT TGCTCCGATT AAGATTACTT ATGATCCAAT CATTTGTGCC
TTATTTGGTG GCGTAATTAA TGGGGTCGGA ACGGGAATTG CCTTGAAATC AGGAATTTCT
ACAGGTGGTT TAGATGTTCT AGGCATTATT TTAAGAAAAA AGACTGGCAA GAGTTTCGGC
CAAATTAATA TTTTCTTTAA TCTAATCATT GTTATCTGTG CTGGTTTTGT ATTTGGCTGG
ACGAGAGCTT TATATACTGC TTTAAACATT TTTGTTAATG GTAGAGTAAT TGACGCTGTT
TATACGCAGC ATCAAAAAAT GCAGGTCTTT ATCGTTACTG AACACCCGAA ACATATTATT
GAAGGTATTC AGCGCAAGAT GCACCGAGGT ATTACGATCT TTCATGATGT TGAAGGTGCG
TATAGTCATA CGGAAAAGAC CGTCTTAATG ACAATCATTG ATCGTTACGA TATGTTCGAT
ATTTATAATA TTGTTATTCA ATCTGATCCT TATGCATTTA TGAGTGTAAG TGAAGTTGAT
AAAGTATACG GACGCTTCAA GGAGCAGAAA CCAGTTTAA
 
Protein sequence
MSQLEKLSRR HYLISKLSAA FLYALAVAVA LNFFWGPGKI YASGITGFAQ IIQSVSERFM 
PFTLSTSVMY FVLNIPLFIL GWCKIGHRFT IFTIIAVLLG SIMMRVIAPI KITYDPIICA
LFGGVINGVG TGIALKSGIS TGGLDVLGII LRKKTGKSFG QINIFFNLII VICAGFVFGW
TRALYTALNI FVNGRVIDAV YTQHQKMQVF IVTEHPKHII EGIQRKMHRG ITIFHDVEGA
YSHTEKTVLM TIIDRYDMFD IYNIVIQSDP YAFMSVSEVD KVYGRFKEQK PV