| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1071 |
|---|
| Symbol | |
|---|
| ID | 4439709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1073133 |
|---|
| End bp | 1073780 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639672912 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_814882 |
|---|
| Protein GI | 116629710 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 100 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATGACAC AATTTGAAAA CAATAATTTT GGGGACGTAT TACTTAATCG TCATTCAGTT
CGTCACTTTG ATAAGGATGT AAAAATTCCT CGCGAAGAAC TTAGAGAAAT GATCAAAGAA
ACAATTACTG CACCATCTGC ATGTAATTTG CAAGCTTGGC AGTTCATCGT AGTAGACACT
GACGAAGGCA AGAAGAAGTT GCATGAATTT TACATGCCAT TTAATAATCC GCAAATTGAT
ACTTCAAGTG CAATTATTCA AATCTTTGGC AATACTTTAG CTTTTAAGAA GTATCGTGCT
CTGTGGGATC ATATGTATGA AGAAAAGAGA ATTTCCAAAG AAGAATTAGA CAAGGTCTAC
AATACTTTTT TACCATTGTA TGAACATGCG GATAAGACAA TGCTTACTGC TGATGCAATG
GTTGATTCTT CCCTTGCTGC CATGCAGTTG ATGCTGGTTG CTCGAGCACA CGGCTATGAA
ACAAATGCAA TGGCTGGTTA TGATGCTAAA AAAGCTGCCA GCGTAATGGG ACTTGATCCA
GCACAATATG TTCCTGTGAT GGGTATTGCG ATTGGTAAAC CTGATAAGAG TGCGGAAGAA
TTGAAGTCGG TTAGATATCC AGTTGATGAT ATTTTGAAAT TTGAATAG
|
|---|
| Protein sequence | MMTQFENNNF GDVLLNRHSV RHFDKDVKIP REELREMIKE TITAPSACNL QAWQFIVVDT
DEGKKKLHEF YMPFNNPQID TSSAIIQIFG NTLAFKKYRA LWDHMYEEKR ISKEELDKVY
NTFLPLYEHA DKTMLTADAM VDSSLAAMQL MLVARAHGYE TNAMAGYDAK KAASVMGLDP
AQYVPVMGIA IGKPDKSAEE LKSVRYPVDD ILKFE
|
|---|
| |