| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1041 |
|---|
| Symbol | |
|---|
| ID | 4439749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1051467 |
|---|
| End bp | 1051862 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639672884 |
|---|
| Product | D-ribose pyranase |
|---|
| Protein accession | YP_814854 |
|---|
| Protein GI | 116629682 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CGGGAGTAAT GAACTCAAAT ATTTCTAGAG TGATTGCTGA CATGGGACAT
ATGGATTGGT TAGGCGTGGG GGATGCAGGA ACTCCTGTGC CAGCTGAAAC TGAAAAGATT
GATTTATCGG TTAGACCAGG CTTGCCATCA TTTATTGATG TTTTAGAAGA AGTTCTTAAA
GAATTAGAAG TTCAGAAAAT ATATATTGCT GAAGAAATTA AAACTGAAAA TCCTAAGCAA
TTAGAAGCTA TTAAAAAGAC TCTTCCTAAC GTTGAGATCG AATTTATTCC TCATTCAGAA
CTAAAGAAAG ACTTAAAGAC ATCAAAGGCC TTTATTAGAA CTGGAGAGGA AACTCCATAT
TCTAATGTAA TTTTAGAGAG TGGCGTAACT TTTTAA
|
|---|
| Protein sequence | MKKTGVMNSN ISRVIADMGH MDWLGVGDAG TPVPAETEKI DLSVRPGLPS FIDVLEEVLK
ELEVQKIYIA EEIKTENPKQ LEAIKKTLPN VEIEFIPHSE LKKDLKTSKA FIRTGEETPY
SNVILESGVT F
|
|---|
| |