Gene LGAS_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1032 
Symbol 
ID4439740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1038326 
End bp1041802 
Gene Length3477 bp 
Protein Length1158 aa 
Translation table11 
GC content33% 
IMG OID639672875 
ProductATP-dependent nuclease, subunit B 
Protein accessionYP_814845 
Protein GI116629673 
COG category[L] Replication, recombination and repair 
COG ID[COG3857] ATP-dependent nuclease, subunit B 
TIGRFAM ID[TIGR02773] ATP-dependent nuclease subunit B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.30431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATG TAATTACTGG TAGACAAGTA GACAACTTGC AAAATGAGAT TATCGATCAA 
GCTGTTAAGT CATATTACCA AGATAAAACG CACGATGTTT TTATTATCGT GCCAAACCAT
ATTAAGTTTA CCACAGAAGT ACGAGCACTT AGCAAGCTCT CTGTTTTAAC AAATAAAAAA
CAAGTAGCAG TTAATAAACT CCATATTCTT TCTTTTTCAA GACTAGCCTG GTATTTTTTG
AAAGATGAAG CAATCAAATT ACCGCAAATT CTGGATGATG CCGCTAGTGT GATGCTACTT
GAACAAATTG TTAAGGATCA TCAGGACGAA TTAAAACTAT TTCAAAATAA AAATCAAATT
ACGTCTGGTG CTTTAAGGCA AATGTATGAA GCGATTTTAT CGGTTCGGGC TGGAAATATT
GACTTAGAAA ACATTGATAA TGAAAAATTA AATGAAGAAA CCAGCTATAA AGTCCATGAT
TTGCAAATTA TCTATGATGA TTTTATTGAT CGTCTATCTG AAAAATTTGC AACTAAAGAT
GAGATGCAGC TCTTGCTTAA TGAGTTTTTA GCTAAAAGCG ATAGTTTAAG CACGATGGTA
TTTTACTTCT CCGATTTTTC GCATTTTTCC TTGCAAGAAT TAACTTCAGT ACGCTTAATT
TCAAAAAAAG CTAAGAATAC GACTTTGGCG TTTAAGACAA AAATTGGCAA AATAGATAGT
AAAGCGGAAC AAGGAGACTA TGATTATGTG GTTCAAAGAA CAATTAGACA ACTAGAGCAT
TTTTGGCAAA ATCAGCAATT AAATTATCAA ACTACTGAAT TTCCACTTAC TAAAACTAAT
CCTAGCTCCC TATTAAATGG AGTTTGGACC AAGACAAATG GTTTTGATGA AAGTTTAAGT
AAGTTTTTGC AGCCAGTTAA AGCAGATTCT AGATATGCCG AAGCATATTT TGTTGCGCGG
ACAATCTACC AGCAAGTTGC TTTAAACAAT TATCGTTATC AAGACTTTTT AGTTTTAGCG
CCAAATCTAA ATGAATATGA AACTTACTTA ACGCCAATTT TGCGTCAAAA TAATATTCCT
TTCTTCAATG ACCTGCAAAA AGAGATGAAG TATCATCCCT TAGTCGTTGC GGTAGAAAAT
CTCCAGCAAA TTTTTAAGCG GGGTTTTCAA ACAGATAATG TAATTGCTCT AATGAAAACG
CAGCTTTTTA TTCCCGAATG GTATAAAAGC GTAGCGCGTT ATCAAAATGA TGTAGATTTA
CTTGAAAACT TTGTGTTGGC ACATGGTATT AAGGGAGAAC TTTGGAAAAA ACCTTTAAAA
AGTTTTGTGG ATGCGGAAGT AATTGCACTT GATAAGTCAG AGCAAGAGGT AGAAGAACTT
GACCGTTTGC GTAAATACTT TATTAGTATT CTAAGTGAAT TTTTTGAAGA TATAGAAACA
GAAAAAGATC CGCAAGCTGG AGTGACGATT TTTTGGAACT TCTTAATTAA AAATCGAGTT
GCAAAAAGAC TAGAGGCTTG GCGAAAGGAA GCAAATGATG CTGGCGACTT ACAGTTAGCG
CAGCAACCTG AACAAGTTTG GTCAACCTTA AACGATTTGT TAAAGGACTA CTTATTAGTA
GCTAAGGAAT TTTCTTTAGA ACAATTTTTT GATCTCTTAA TTAGCGGATT TAGTGAGGCT
AATTTTTCAC AAATTCCATC TACTCTTGAT GCAGTTAATA TCTCTGAAAT GGGAATGGTT
CAAGGACAAG GTTATAAGCA AGTATTTATT ATTGGGGCAA CAAGTAGTAA TTTGCCGCAG
ATTGAAAAAA TTCCAGGTTT CTTTAGTTCA GAAAACTTAG AACAACTAAA TGATGGAAAT
AATGCTAGTG GCTATTTAGA AGATCAGCAA AAAATTAATA ATCTAGATCA GAATTATCAA
TTTGGTAATG CACTAAGTTT AGCTAGTGAT AAGATTTATA TTTCTTATCC TGTAATTAAT
ACGGCAAATG AACAATTAGA ACCATCTATC TTTTATAAAC AACTTCTCAG GTTAACTCAG
GCAAATGAAT TTTCACAGCA TGATTTACCT AGTTCTGCTG GCGATCTTTT AACTTTTATG
ACTAATCCGG AAGCTAGTCT AGGTTACTTA ACTTATTTAA AGGGCAAACA AGAAGTTAAT
GTAGATTCTA TCTTGGAGTT GACTGAGCAA GAAATAGGCG AAGTAGCTCA AAATGTGCTT
GAAGGAAGTA ATTTTAAGAA TGTTCCTGAG AATCTCCCTC CCAAATTGGC CCAAGAACTA
TACGGAGATC GGATAGAGAC TTCAGTTTCA CAACTTGAGA CCTATTACCA GAATTCTTTT
GAATATTTCT TAAATTATGG GCTTCATTTA AAGAAGAGGT TTGAAAATGA GCTTGATGTA
ATTCAAGCAG GTAATTATTA TCACGAAACG TTTGACTATT TAGTTAAAAA AATTAAGGAA
AAAAACTTGG ATTTTGCTGA TTTAACTGAC AGTAAGTTAA ATCAGCTACT AATTGAAGTA
CGAGAAGAAT TAAAAGAAAA GGGGAGATAT CGTCAGCTTT TAAACGATCC ATTCAATAAA
TATTTGTTCC ATAAGCTAGA CCAAACTACA TCTAATGTTG CCCATTATTG GCATAGTAAT
GTAAATAAAA CAACTTTTAG ACCACAATAT TCGGAATTAA GTTTCGGCAA AAATCAAAAA
GTGACAGGGC TATCTTATAG CTGGAAAGAT GAAAATAATC AAAAGAAGAT TGTTGATCTA
CGAGGAAAAA TGGATCGAGT TGATCTGGCT AAGGTGAATG ATCGAGTTTT AGGAGAGGTA
ATTGACTATA AGTCTTCTGC GAAGAAATTT GACTTAGGCC TCTTTGCCAA TGGGATTTCA
ATGCAGATGA TTTCTTATTT GGAAGTCTTA AAAAAGAATA ATAAGTTTTT TGCTCAAGGT
AAAAACTTAG ATGTTTTAGG AGCTTTTTAT CAAAATATTA CTAGCAGCTT GGAACGCTTA
AGTAGTGATA AGATGATTCT AAGTAACTAT CAAATTAAGG ATCTTCTCAA AGAAAGCACA
AAGAAGCTAA TGTATAACGG AATTTTAGTT GCCGATGAAG AGATTCTGGA CCTAATTGAA
CCAGGAATGG AGAAAGATCG AGCTACTTCG GAAATATATA GCAGCATTAA AAGAAAGGTT
AATGGTGATA TTAGCTGGCC ACGAAATCAG AGCTTTACCC CTGATCAACT AGAATTGCTG
TTAGCATATA ACTCTTACTT AATCAAGAAT GCTGGAAGTG AAATCTTATC AGGTAAGATT
AAACTTGATC CATATACTTA TGGACAACAA AGTTCCTTAA CTTATTCTGA CTTTAAAGAT
ATTTTCTTCT TTGATGCTAT GTTAAAAGAA AATAATTACC ATAAGATTAA AGCAATTGAT
AAGAAGACGC TTTTAAACTT AATTAAAGAA AAACTGGATT TGGATGGTGA CGAATAG
 
Protein sequence
MINVITGRQV DNLQNEIIDQ AVKSYYQDKT HDVFIIVPNH IKFTTEVRAL SKLSVLTNKK 
QVAVNKLHIL SFSRLAWYFL KDEAIKLPQI LDDAASVMLL EQIVKDHQDE LKLFQNKNQI
TSGALRQMYE AILSVRAGNI DLENIDNEKL NEETSYKVHD LQIIYDDFID RLSEKFATKD
EMQLLLNEFL AKSDSLSTMV FYFSDFSHFS LQELTSVRLI SKKAKNTTLA FKTKIGKIDS
KAEQGDYDYV VQRTIRQLEH FWQNQQLNYQ TTEFPLTKTN PSSLLNGVWT KTNGFDESLS
KFLQPVKADS RYAEAYFVAR TIYQQVALNN YRYQDFLVLA PNLNEYETYL TPILRQNNIP
FFNDLQKEMK YHPLVVAVEN LQQIFKRGFQ TDNVIALMKT QLFIPEWYKS VARYQNDVDL
LENFVLAHGI KGELWKKPLK SFVDAEVIAL DKSEQEVEEL DRLRKYFISI LSEFFEDIET
EKDPQAGVTI FWNFLIKNRV AKRLEAWRKE ANDAGDLQLA QQPEQVWSTL NDLLKDYLLV
AKEFSLEQFF DLLISGFSEA NFSQIPSTLD AVNISEMGMV QGQGYKQVFI IGATSSNLPQ
IEKIPGFFSS ENLEQLNDGN NASGYLEDQQ KINNLDQNYQ FGNALSLASD KIYISYPVIN
TANEQLEPSI FYKQLLRLTQ ANEFSQHDLP SSAGDLLTFM TNPEASLGYL TYLKGKQEVN
VDSILELTEQ EIGEVAQNVL EGSNFKNVPE NLPPKLAQEL YGDRIETSVS QLETYYQNSF
EYFLNYGLHL KKRFENELDV IQAGNYYHET FDYLVKKIKE KNLDFADLTD SKLNQLLIEV
REELKEKGRY RQLLNDPFNK YLFHKLDQTT SNVAHYWHSN VNKTTFRPQY SELSFGKNQK
VTGLSYSWKD ENNQKKIVDL RGKMDRVDLA KVNDRVLGEV IDYKSSAKKF DLGLFANGIS
MQMISYLEVL KKNNKFFAQG KNLDVLGAFY QNITSSLERL SSDKMILSNY QIKDLLKEST
KKLMYNGILV ADEEILDLIE PGMEKDRATS EIYSSIKRKV NGDISWPRNQ SFTPDQLELL
LAYNSYLIKN AGSEILSGKI KLDPYTYGQQ SSLTYSDFKD IFFFDAMLKE NNYHKIKAID
KKTLLNLIKE KLDLDGDE