Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1032 |
Symbol | |
ID | 4439740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1038326 |
End bp | 1041802 |
Gene Length | 3477 bp |
Protein Length | 1158 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639672875 |
Product | ATP-dependent nuclease, subunit B |
Protein accession | YP_814845 |
Protein GI | 116629673 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3857] ATP-dependent nuclease, subunit B |
TIGRFAM ID | [TIGR02773] ATP-dependent nuclease subunit B |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.30431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAATG TAATTACTGG TAGACAAGTA GACAACTTGC AAAATGAGAT TATCGATCAA GCTGTTAAGT CATATTACCA AGATAAAACG CACGATGTTT TTATTATCGT GCCAAACCAT ATTAAGTTTA CCACAGAAGT ACGAGCACTT AGCAAGCTCT CTGTTTTAAC AAATAAAAAA CAAGTAGCAG TTAATAAACT CCATATTCTT TCTTTTTCAA GACTAGCCTG GTATTTTTTG AAAGATGAAG CAATCAAATT ACCGCAAATT CTGGATGATG CCGCTAGTGT GATGCTACTT GAACAAATTG TTAAGGATCA TCAGGACGAA TTAAAACTAT TTCAAAATAA AAATCAAATT ACGTCTGGTG CTTTAAGGCA AATGTATGAA GCGATTTTAT CGGTTCGGGC TGGAAATATT GACTTAGAAA ACATTGATAA TGAAAAATTA AATGAAGAAA CCAGCTATAA AGTCCATGAT TTGCAAATTA TCTATGATGA TTTTATTGAT CGTCTATCTG AAAAATTTGC AACTAAAGAT GAGATGCAGC TCTTGCTTAA TGAGTTTTTA GCTAAAAGCG ATAGTTTAAG CACGATGGTA TTTTACTTCT CCGATTTTTC GCATTTTTCC TTGCAAGAAT TAACTTCAGT ACGCTTAATT TCAAAAAAAG CTAAGAATAC GACTTTGGCG TTTAAGACAA AAATTGGCAA AATAGATAGT AAAGCGGAAC AAGGAGACTA TGATTATGTG GTTCAAAGAA CAATTAGACA ACTAGAGCAT TTTTGGCAAA ATCAGCAATT AAATTATCAA ACTACTGAAT TTCCACTTAC TAAAACTAAT CCTAGCTCCC TATTAAATGG AGTTTGGACC AAGACAAATG GTTTTGATGA AAGTTTAAGT AAGTTTTTGC AGCCAGTTAA AGCAGATTCT AGATATGCCG AAGCATATTT TGTTGCGCGG ACAATCTACC AGCAAGTTGC TTTAAACAAT TATCGTTATC AAGACTTTTT AGTTTTAGCG CCAAATCTAA ATGAATATGA AACTTACTTA ACGCCAATTT TGCGTCAAAA TAATATTCCT TTCTTCAATG ACCTGCAAAA AGAGATGAAG TATCATCCCT TAGTCGTTGC GGTAGAAAAT CTCCAGCAAA TTTTTAAGCG GGGTTTTCAA ACAGATAATG TAATTGCTCT AATGAAAACG CAGCTTTTTA TTCCCGAATG GTATAAAAGC GTAGCGCGTT ATCAAAATGA TGTAGATTTA CTTGAAAACT TTGTGTTGGC ACATGGTATT AAGGGAGAAC TTTGGAAAAA ACCTTTAAAA AGTTTTGTGG ATGCGGAAGT AATTGCACTT GATAAGTCAG AGCAAGAGGT AGAAGAACTT GACCGTTTGC GTAAATACTT TATTAGTATT CTAAGTGAAT TTTTTGAAGA TATAGAAACA GAAAAAGATC CGCAAGCTGG AGTGACGATT TTTTGGAACT TCTTAATTAA AAATCGAGTT GCAAAAAGAC TAGAGGCTTG GCGAAAGGAA GCAAATGATG CTGGCGACTT ACAGTTAGCG CAGCAACCTG AACAAGTTTG GTCAACCTTA AACGATTTGT TAAAGGACTA CTTATTAGTA GCTAAGGAAT TTTCTTTAGA ACAATTTTTT GATCTCTTAA TTAGCGGATT TAGTGAGGCT AATTTTTCAC AAATTCCATC TACTCTTGAT GCAGTTAATA TCTCTGAAAT GGGAATGGTT CAAGGACAAG GTTATAAGCA AGTATTTATT ATTGGGGCAA CAAGTAGTAA TTTGCCGCAG ATTGAAAAAA TTCCAGGTTT CTTTAGTTCA GAAAACTTAG AACAACTAAA TGATGGAAAT AATGCTAGTG GCTATTTAGA AGATCAGCAA AAAATTAATA ATCTAGATCA GAATTATCAA TTTGGTAATG CACTAAGTTT AGCTAGTGAT AAGATTTATA TTTCTTATCC TGTAATTAAT ACGGCAAATG AACAATTAGA ACCATCTATC TTTTATAAAC AACTTCTCAG GTTAACTCAG GCAAATGAAT TTTCACAGCA TGATTTACCT AGTTCTGCTG GCGATCTTTT AACTTTTATG ACTAATCCGG AAGCTAGTCT AGGTTACTTA ACTTATTTAA AGGGCAAACA AGAAGTTAAT GTAGATTCTA TCTTGGAGTT GACTGAGCAA GAAATAGGCG AAGTAGCTCA AAATGTGCTT GAAGGAAGTA ATTTTAAGAA TGTTCCTGAG AATCTCCCTC CCAAATTGGC CCAAGAACTA TACGGAGATC GGATAGAGAC TTCAGTTTCA CAACTTGAGA CCTATTACCA GAATTCTTTT GAATATTTCT TAAATTATGG GCTTCATTTA AAGAAGAGGT TTGAAAATGA GCTTGATGTA ATTCAAGCAG GTAATTATTA TCACGAAACG TTTGACTATT TAGTTAAAAA AATTAAGGAA AAAAACTTGG ATTTTGCTGA TTTAACTGAC AGTAAGTTAA ATCAGCTACT AATTGAAGTA CGAGAAGAAT TAAAAGAAAA GGGGAGATAT CGTCAGCTTT TAAACGATCC ATTCAATAAA TATTTGTTCC ATAAGCTAGA CCAAACTACA TCTAATGTTG CCCATTATTG GCATAGTAAT GTAAATAAAA CAACTTTTAG ACCACAATAT TCGGAATTAA GTTTCGGCAA AAATCAAAAA GTGACAGGGC TATCTTATAG CTGGAAAGAT GAAAATAATC AAAAGAAGAT TGTTGATCTA CGAGGAAAAA TGGATCGAGT TGATCTGGCT AAGGTGAATG ATCGAGTTTT AGGAGAGGTA ATTGACTATA AGTCTTCTGC GAAGAAATTT GACTTAGGCC TCTTTGCCAA TGGGATTTCA ATGCAGATGA TTTCTTATTT GGAAGTCTTA AAAAAGAATA ATAAGTTTTT TGCTCAAGGT AAAAACTTAG ATGTTTTAGG AGCTTTTTAT CAAAATATTA CTAGCAGCTT GGAACGCTTA AGTAGTGATA AGATGATTCT AAGTAACTAT CAAATTAAGG ATCTTCTCAA AGAAAGCACA AAGAAGCTAA TGTATAACGG AATTTTAGTT GCCGATGAAG AGATTCTGGA CCTAATTGAA CCAGGAATGG AGAAAGATCG AGCTACTTCG GAAATATATA GCAGCATTAA AAGAAAGGTT AATGGTGATA TTAGCTGGCC ACGAAATCAG AGCTTTACCC CTGATCAACT AGAATTGCTG TTAGCATATA ACTCTTACTT AATCAAGAAT GCTGGAAGTG AAATCTTATC AGGTAAGATT AAACTTGATC CATATACTTA TGGACAACAA AGTTCCTTAA CTTATTCTGA CTTTAAAGAT ATTTTCTTCT TTGATGCTAT GTTAAAAGAA AATAATTACC ATAAGATTAA AGCAATTGAT AAGAAGACGC TTTTAAACTT AATTAAAGAA AAACTGGATT TGGATGGTGA CGAATAG
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Protein sequence | MINVITGRQV DNLQNEIIDQ AVKSYYQDKT HDVFIIVPNH IKFTTEVRAL SKLSVLTNKK QVAVNKLHIL SFSRLAWYFL KDEAIKLPQI LDDAASVMLL EQIVKDHQDE LKLFQNKNQI TSGALRQMYE AILSVRAGNI DLENIDNEKL NEETSYKVHD LQIIYDDFID RLSEKFATKD EMQLLLNEFL AKSDSLSTMV FYFSDFSHFS LQELTSVRLI SKKAKNTTLA FKTKIGKIDS KAEQGDYDYV VQRTIRQLEH FWQNQQLNYQ TTEFPLTKTN PSSLLNGVWT KTNGFDESLS KFLQPVKADS RYAEAYFVAR TIYQQVALNN YRYQDFLVLA PNLNEYETYL TPILRQNNIP FFNDLQKEMK YHPLVVAVEN LQQIFKRGFQ TDNVIALMKT QLFIPEWYKS VARYQNDVDL LENFVLAHGI KGELWKKPLK SFVDAEVIAL DKSEQEVEEL DRLRKYFISI LSEFFEDIET EKDPQAGVTI FWNFLIKNRV AKRLEAWRKE ANDAGDLQLA QQPEQVWSTL NDLLKDYLLV AKEFSLEQFF DLLISGFSEA NFSQIPSTLD AVNISEMGMV QGQGYKQVFI IGATSSNLPQ IEKIPGFFSS ENLEQLNDGN NASGYLEDQQ KINNLDQNYQ FGNALSLASD KIYISYPVIN TANEQLEPSI FYKQLLRLTQ ANEFSQHDLP SSAGDLLTFM TNPEASLGYL TYLKGKQEVN VDSILELTEQ EIGEVAQNVL EGSNFKNVPE NLPPKLAQEL YGDRIETSVS QLETYYQNSF EYFLNYGLHL KKRFENELDV IQAGNYYHET FDYLVKKIKE KNLDFADLTD SKLNQLLIEV REELKEKGRY RQLLNDPFNK YLFHKLDQTT SNVAHYWHSN VNKTTFRPQY SELSFGKNQK VTGLSYSWKD ENNQKKIVDL RGKMDRVDLA KVNDRVLGEV IDYKSSAKKF DLGLFANGIS MQMISYLEVL KKNNKFFAQG KNLDVLGAFY QNITSSLERL SSDKMILSNY QIKDLLKEST KKLMYNGILV ADEEILDLIE PGMEKDRATS EIYSSIKRKV NGDISWPRNQ SFTPDQLELL LAYNSYLIKN AGSEILSGKI KLDPYTYGQQ SSLTYSDFKD IFFFDAMLKE NNYHKIKAID KKTLLNLIKE KLDLDGDE
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