| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1025 |
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| Symbol | |
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| ID | 4439770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1026210 |
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| End bp | 1028585 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672868 |
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| Product | membrane carboxypeptidase (penicillin-binding protein) |
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| Protein accession | YP_814838 |
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| Protein GI | 116629666 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA ACAATCAAAA GCCAACTAAT TCTAGAATGG CTAACCTTCA CCCCGAAGGT
AAACCGCGTA AAAAAATTTG GCTACAAATA ATTAAATGGT TCTTTATTGT AGCAATGTTA
ATCATCGTTT CTGGGGTAGG ACTATTTGCG TATTACGCTA AAGACGCTCC TAGCATTTCA
CAAGCTCAAC TTCAAAGCGG CGGAACGAGT AGCCTTTATA CTCGAGATGG AAAATTTCTT
CTTTCTTTAG GTTCTGAAAA AAGGACTTAC GTCAATAATG ATGAAATTCC TAAAGAGCTC
AAAAATGCTA TTGTCTCTGT CGAAGATAGA CGTTTTTATA AAGAAGGAAT TGGACTTGAC
CCAATTCGAA TTGTTGGCTC TGTCCTAGTT AACGCTAAAA GTAAAGGCGT TGCTGCCGGT
GGATCAACTA TCACTCAACA ATTAGTTAAG CTTTCTGTTT TTTCAACCGC TGCTTCGCAA
AGAACCCTTC GAAGAAAAGC CCAAGAAGCA TGGCTCTCAA TGAAAGTTGA ACGAGAATTT
AGTAAAGAAC AAATTTTAGA GTTCTATATT AATAAGGTAT ACATGAATTA CGGTAACTAT
GGAATGGGTA CTGCAGCAGA TTTTTACTAT GGCAAGGATC TAAAGGATCT TGACTTAGCA
CAAACTGCCC TTCTTGCAGG GATGCCTAAT GCACCAGTTA CCTATGACCC ATATGTTTAC
CCAGAAAAGG CTAAGTATAG AAGAGATATT GTTTTAAGAG CAATGCTTAA AAACGATAAG
ATTACTAAAT CCCAATATAC ACAAGCTGTT AATGAGCCAA TCACTCAAGG ATTACAACCT
AAGAAGAACA ATGCAACTTC AGAACTAAGA AAGGTTGATG ATCCATACAT TAAAGAAGTA
ATCAGCGAAG TTAAAAGCAA AGGATTTAAT CCTTATAATG ACAACTTAAA GATTACTGTT
AATATTGATC AAGATGCTCA ACAAAAACTT TATGATCTAG TAAACAATGG ATCGGTTCCA
TTTACTAACG ATAAGATGCA AGTTGGTGCA ACAATTATTG ATCCAAGAAC TGGACATGTT
ATTGCCATTA TTGGCGGACG CAAGCTCCCC TCTGTTCAAT TAGGTTTAAA CCGCGCTGTT
CAAACTGGCC GTTCAACTGG ATCCACTGTT AAACCGGTAT TAGACTATGG TCCAGCAATT
GAATATCTTA ACTGGCCAAC TTCTCATATA TTAGATGATT CTAAGTATGT TTACCCTGGT
ACTAATATTC AACTTTATGA CTGGGATAAT AAATACGAAG GCAAAATGAC TATGCGTCAT
GCTCTAGAAC AATCAAGAAA CGTTCCTGCA GTTAAAACCT TAAGTAAGGT TGGGGTTGCA
CGTGCATCAC TCTTTGCAAG AAAACTCGGC GTTAACGTTC CTTCTGATTC TGGCTTATCA
GTCGCAATCG GGGCTAATGC TTCTTCTCTT CAAATGGCAG GAGCTTTTGG TGCCTTTGCT
AATAATGGTG TTTACCATAA GCCACAATTT GTTTCTAAAA TTGAAACGCC AGATGGTTTA
ACTAGAAATT ATGATAGCAG TGGTACTAGA GTCATGAAGG AATCAACAGC ATATATCATG
ACTGATATGC TTAAGGGTGT GTTAACTAAA GGTTCTGGTA CACAAGCTCG AATTAAAAAC
TTATATGAAG CGGGTAAAAC TGGTACTGTT AAATATTCAG ATGAAGAATT GGTAAAATAT
CCTCAATACA AGAATTCGCC AAAAGATTCA TGGTTTGTTG GTTACACTAA ACTTTATTCA
ATGGGGATTT GGACTGGATA TGATAATTTG AAAGATGGTA CCCCATCAGG CGTTGGCTCT
TCTTCAGCTC AACTTCTATA TAAGCAAATG ATGTCTTATC TCATGACAGA CAAAGCTAAT
AAAGATTGGA CAAAGCCAAG CACAGTTGTT AGACGCAGGA TTGCAAATGG TACCCAAGAT
AAAGTAGTTT CTCCTACTGC AAGCAATTCA AGCTGGCAAT TATTTGTCAA AGGTCATGCA
CCCAAAAATC CTTACAGTGA AGTAACCGTC GATAAACGGA AAGATGAAGA TGACGACGTT
GACACAAGAT TTGATACGGA AGATGATACA TCATCTAAGG GGCAATCTCA TTCTCAAAGT
AGCTCTTCAT CAAGTCATGC TGAACAACAA TCATCAAGTC AAAAGCAGTC ATCTACTTCT
AATAACAATA ATTCAAATAA CCAGAATCAA AACAATAATC AGCAGACGGA AAATAAATCT
AACAATCAAA ATAACAATTC CCAACAAAAT ACAAATAACC AAAATAATCA AAATCAACAA
CAAAATCAGG GAAATAATTC CAATAATAAT CATTAA
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| Protein sequence | MADNNQKPTN SRMANLHPEG KPRKKIWLQI IKWFFIVAML IIVSGVGLFA YYAKDAPSIS
QAQLQSGGTS SLYTRDGKFL LSLGSEKRTY VNNDEIPKEL KNAIVSVEDR RFYKEGIGLD
PIRIVGSVLV NAKSKGVAAG GSTITQQLVK LSVFSTAASQ RTLRRKAQEA WLSMKVEREF
SKEQILEFYI NKVYMNYGNY GMGTAADFYY GKDLKDLDLA QTALLAGMPN APVTYDPYVY
PEKAKYRRDI VLRAMLKNDK ITKSQYTQAV NEPITQGLQP KKNNATSELR KVDDPYIKEV
ISEVKSKGFN PYNDNLKITV NIDQDAQQKL YDLVNNGSVP FTNDKMQVGA TIIDPRTGHV
IAIIGGRKLP SVQLGLNRAV QTGRSTGSTV KPVLDYGPAI EYLNWPTSHI LDDSKYVYPG
TNIQLYDWDN KYEGKMTMRH ALEQSRNVPA VKTLSKVGVA RASLFARKLG VNVPSDSGLS
VAIGANASSL QMAGAFGAFA NNGVYHKPQF VSKIETPDGL TRNYDSSGTR VMKESTAYIM
TDMLKGVLTK GSGTQARIKN LYEAGKTGTV KYSDEELVKY PQYKNSPKDS WFVGYTKLYS
MGIWTGYDNL KDGTPSGVGS SSAQLLYKQM MSYLMTDKAN KDWTKPSTVV RRRIANGTQD
KVVSPTASNS SWQLFVKGHA PKNPYSEVTV DKRKDEDDDV DTRFDTEDDT SSKGQSHSQS
SSSSSHAEQQ SSSQKQSSTS NNNNSNNQNQ NNNQQTENKS NNQNNNSQQN TNNQNNQNQQ
QNQGNNSNNN H
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