| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1003 |
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| Symbol | |
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| ID | 4439799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1001528 |
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| End bp | 1003321 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672846 |
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| Product | superfamily II DNA helicase |
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| Protein accession | YP_814817 |
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| Protein GI | 116629645 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000133719 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT TACAAGTATT AAAAGATGTA TTTGGCTACA CAACTTTTCG AGCAGGACAA
GAAAAAGTTA TTAATTTGGT GCTTAAAGGA GAAAATGTTC TAGCAGTAAT GCCAACTGGT
GCAGGCAAAT CGCTGTGTTA TCAAATTCCT GCCTTAATTA ACCCTGGTTT AACTTTGGTA
GTTTCACCCT TAATTTCACT AATGAAAGAC CAAATTGATT CATTAAAACA AAATGGTATT
AATGCGGCAG CCCTAAATTC GGCGACTCCT CAAGAAGAAG TAAATCCAAT TTTAAGGCAA
GCCTATGAAG GAAAAATAAA GCTGCTTTAT GTAACTCCTG AGCGATTAGC AATGAATTAT
TTTCGCTATC AGCTGAACTT CTTAAATGTT TCATTAGTCG CAGTCGATGA AGCACACTGT
ATTTCACAAT GGGGACATGA TTTTCGACCA GCTTATCGCC AAATAATGGA TGGCGTCAAA
TCAATTAAGA GTAATCCGAA TATTTTAGCT TTAACTGCAA CAGCAACCCC CTCAGTTCAA
AAAGACATCG CTGACCAATT GCAGATACCT TCTGCCAATT ATGTTATTAC TTCATTTGCA
AGGCCCAATC TAAGCTTCAA GGTAGTGGAT AATCCTAAAA ATACTAATTT GTATCTTTTA
GACTATATTA AACAGCATCC CCATGAATCT GGAATCATAT ATGCTAGTAC AAGAAAACAC
GTTGAAGAAT TAACTGACTA TTTGGCTCAA AATGGCATTT TAACAGCTAG TTATCACGCT
GGTCTTTCTA ATAAAGAGAG GGCAGATGTA CAAGATGCTT TTCAATTCGA TAAAGTACAA
GTAATAGTGG CTACTAATGC TTTTGGAATG GGAATTGACA AAAGAAATGT TCGTTTTGTC
ATTCATGCTA ACAGTACACC AAATTTAGAA TCATATTATC AAGAAGCCGG CAGAGCAGGT
AGAGACGGTG AAGCTTGTGA GGGGATATTA ATCTATCACC CTAAAGATAT TCGACTCTAT
CGCTGGTTTA TTGAACAATC TGATTTAGAT GACGAGTATC AAAAAATACA ATATCAAAAA
CTAGCTATGA TTACTAAATA TGTAAATACC ACAGAGTGTT TACAACAGTT TATTGTCAGC
TATTTTGGGC AAAGCTGTGA TCCTTGTGGC AAGTGTTCTA ACTGTTTAGG AACCTTTATT
GAAAAAGACA TTACTTCAGA AAGTAAAAGT ATCATTTCAA CTATTTATGA ACTGGATGGT
CGTTTTGGTA AGACTGTGGT TGCTGATGTA GTTTCAGGAG CAAATAATCA ACGCATGAGA
GAAATTGATG CAGCTCATCT AAAACATTAT GGTAGTTTAA AGCTGGGAAA GACTAAGATC
CTAGATTTAA TAAATTATCT AATTAGCCAT AATTATTTAC AACTAACTGA TAGTCAGTAT
CCATTAGTTC ATGTGACTAA TTTAGGATGG GACGTCTTAG ATAATAAAAA GCGTGTAACT
CAAAAAATTT CTAAAAAAAG AGAAAGGTTA ATTCAAACTT CTAGTCAAGT TTCCAAAGAG
GAAAATGACC TGTTTGTTAG ATTAAAAGAA ATTCGCTTAG GTTTGGCTAA AAAGCAGGGG
ATACCAGCTT TTTATATCTT TTCAGACAAG TCTTTAAGAG AAATGTCACT GCAAAAGCCT
GAAACACAAG CAGATCTTTT AAATATTTCG GGAGTAGGTC AAGCAAAGCT TAAAGCCTAT
GGTCAAATTA TGTTAGTTGC AATTAAAAAT TACTTGAAAG AACAGACAGA CTAA
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| Protein sequence | MKSLQVLKDV FGYTTFRAGQ EKVINLVLKG ENVLAVMPTG AGKSLCYQIP ALINPGLTLV
VSPLISLMKD QIDSLKQNGI NAAALNSATP QEEVNPILRQ AYEGKIKLLY VTPERLAMNY
FRYQLNFLNV SLVAVDEAHC ISQWGHDFRP AYRQIMDGVK SIKSNPNILA LTATATPSVQ
KDIADQLQIP SANYVITSFA RPNLSFKVVD NPKNTNLYLL DYIKQHPHES GIIYASTRKH
VEELTDYLAQ NGILTASYHA GLSNKERADV QDAFQFDKVQ VIVATNAFGM GIDKRNVRFV
IHANSTPNLE SYYQEAGRAG RDGEACEGIL IYHPKDIRLY RWFIEQSDLD DEYQKIQYQK
LAMITKYVNT TECLQQFIVS YFGQSCDPCG KCSNCLGTFI EKDITSESKS IISTIYELDG
RFGKTVVADV VSGANNQRMR EIDAAHLKHY GSLKLGKTKI LDLINYLISH NYLQLTDSQY
PLVHVTNLGW DVLDNKKRVT QKISKKRERL IQTSSQVSKE ENDLFVRLKE IRLGLAKKQG
IPAFYIFSDK SLREMSLQKP ETQADLLNIS GVGQAKLKAY GQIMLVAIKN YLKEQTD
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