| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1001 |
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| Symbol | |
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| ID | 4439797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 999447 |
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| End bp | 1000400 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639672844 |
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| Product | transcriptional regulator |
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| Protein accession | YP_814815 |
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| Protein GI | 116629643 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000235547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA ATACTGATGC AGTTCTATCT GCGAAATCTT TACGTTACTT TCTTCAATTA
ATTGATAACA TGAGTTACAC TCAAGCAGCT CAAATCTTAG GAATAACCCA ACCAGCATTA
ACTCAACAAA TTAAGAAGCT AGAGCGTGCA GTTGGATCTC CCTTATTTGG TCAAATGGGA
AAAAAGCTTT ACTTAACTGA TGCAGGTCTA AAAATGGAGG AAACAGCTAA GGCACTATTT
TCAACGGTTA ACAATGCTGT TGATAGTATT CAGCAATATA CAAAATCAGA TACTGGAACT
ATTTCCTTAG GTGTATTATC TACGATTGAA GCTAGGGTTA TTGATCAATT TTTGATTGAA
TTTAACCAAA AATATCCAGA GATAACGTTA CATGTTGGCT TTTACAATAG AACAGAGCTT
TGGGATAAAT TAGATAATAA TCAATTAGAT CTAGCAGTTC TTTATATGCC AGATCACAAC
GCGACTGTTA AAAACATGAA ACAATATATG GCTAAGCAAA TTTATCCTGA ATCAGTAGTA
TTTTTAACTC ATAATTCAGA AGCAAAGTTT AATAAGTTAA CACAACATAA GTGGGTAACT
TATCCTAAGG ATTACTACTT ACCTCAAATT GTGCGTCGAT TTTATGCTGC TGAATTTCCG
AATAATGAGT TGCCAGCTTC AGTTACTTTT ACTGCTCCTT ATCAACTAAT AAAATTCGCA
GAACAAACGG ATTACAATAC TTATGTTTCA AAGAGTTTTT ATAAAGCACA TAAAGCTAAA
ATCACGCTTT CCCCATTAGA GCCAAAACAT GAAACAAACT TTGAAAGCTG CTTTATTTAT
CGTAAAAACA AGAGTGAAAT ACCTAGATTA GTTAATTTCT TAAATGAATG GGATAAATTT
ATTAATGAAA AAGATTATGA TAGTCGATTA GAAGAGGTTA AAGTTAATAT TTAA
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| Protein sequence | MKTNTDAVLS AKSLRYFLQL IDNMSYTQAA QILGITQPAL TQQIKKLERA VGSPLFGQMG
KKLYLTDAGL KMEETAKALF STVNNAVDSI QQYTKSDTGT ISLGVLSTIE ARVIDQFLIE
FNQKYPEITL HVGFYNRTEL WDKLDNNQLD LAVLYMPDHN ATVKNMKQYM AKQIYPESVV
FLTHNSEAKF NKLTQHKWVT YPKDYYLPQI VRRFYAAEFP NNELPASVTF TAPYQLIKFA
EQTDYNTYVS KSFYKAHKAK ITLSPLEPKH ETNFESCFIY RKNKSEIPRL VNFLNEWDKF
INEKDYDSRL EEVKVNI
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