Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0903 |
Symbol | |
ID | 4439875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 899616 |
End bp | 901685 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 639672759 |
Product | hypothetical protein |
Protein accession | YP_814730 |
Protein GI | 116629558 |
COG category | [S] Function unknown |
COG ID | [COG1479] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00000406708 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGCTG ATACCTTTAA TATCATTCAA AGATTATTTG ATACATCGCA AATGATATTA AAAATCCCTG TATATCAACG AAATTACGAT TGGACAGAAG GAAATGTTCG TAGATTATTA GAAGATGTTG AAAATGTCAT CAAAAATAAG CAGCAATATT TTATAGGTGC CATTGTTTAT ATGGAATCAG ACAATAATGA TTTGGGAATG CCGGAATTTC TAATTATTGA TGGGCAGCAA CGCATTACGA CATTGACAAT ACTTTTACAA GCATTAAAAG ATCTATGTGT ACAGAGTGAT CAGCAAGTTT TGGAAATGAT AGATTCTTTG CTAACAAATA AGTATTCATC AGATGAATAT AAAATTAAAC TAAAACCAAT TAAGTCTGAC AATATTCAGT ATGAACGGCT ATTGAATGGT AATTTAGATG ATATGGATTA TAATGGCCAT ATTTATAAAA ATTATAAAAT TGCAAAAAAT ATATTCTCAA ATTGGATTAA TAATGGTATT AAACCAATTG AAATTCTTCT AGCATTAAAG AAATTACAAG TAGTAGGAAT TAGTCTTAAA TCAGGAGAAG ATGATCCCCA AATTATTTTT GAGAGTATCA ATTCTACAGG GGTTGCTCTA ACTAATACAG ATTTAATTAG AAATTTCCTT TTAATGGGTG ATCAAGATCA AGATAAACTC TTTGAAGAAT ATTGGCTTCC AATTGAAAAT AAATTAAGAA AAAATAATAA CAATGAAACT TTAGATTTGT TTTTCAGACA ATATGTTATT ACCAAGTCCA ATTCAACTAT TACAGAAAGA AAAGTTTATT CATCTTTTAT AAATCTTTTT AGAGTAAATA ATTTTACTCA TGAGTCTCAG TTAAAAGAAT TGAATATGTA TGCTAATATT TATGCCACTT TTTTGTACCC GAATAATTCT AATTATAATG ATAAAATAAA AGGGTATTTG CTAGATTTAA AACAACTTAA GCAATCTACA TGCTATCCAT TTTTAATGCA TGTATTTAAA GATTATGAAA ATAAGATTAT TGATGAGGAA ACTTTATCTA AAGTTTTATC TTTAATTACA ATTTACTTAA TAAGAAGATC AATTTGTAAT GTTCCAACTA ATTCCTTAAA TACTTTATTT GCTTATCTTT ATGTTCGTGT GTTTAAGGTT ACTAATAATA AAAATAAATA TTATGAGTCA ATTAATAAAT ATTTGTTTAG TCAAAAGAAT AAAGATGAAA TTCCAAATGA TGAAAATGTA AAGTATGCAT TAGAACATGA AAATTTGTAT CAAAATAAAG AATTATGTAG ATTGTTAATG CTGGATATTG AAAATAATGA CTTCAAAGAA AAAATTGATA CTGATAATTT GACTATTGAA CATATCATGC CACAAACATT AAGTAATAGT TGGAAACAGA TTATTTCTGA CGAAGAACAT GATAAATATG TTCATACATT AGGAAACTTG TCTATTACAG GATATAATTC AGAATTATCT AATAAAAGCT TTAAAGAGAA AAAGAAATTA ATCAAGGAGA ATTCAAAAAT TCAAATTTTA AATCAGGATG TGATAAATCA AGACAGTTGG ACCATAAATA ATATTAAGAA ACGTGCAATA CGATTAAGTA GAATTCTCTT AAATAAGTAT TATTTATCGC GTATTACAGA TCCGTCTATT GAATTTGAAT TAGTAGATAA GCTTTCATTA TCAGATCTTC AGAGAATTAA AGGTAGAAAG CCTGTGTCAT TTACTTTACA AGGCGCAAAT TATACGGCCA AAACTTTTAA ACAATTATTA ATAGAAGTAG TACAATTATT GGATCAAGAT AATCCTAAAA TTTTAGATAG TTTAATAGGT TTTCGATTTA GTGAAAGAGA TATTTCTGTT CAAAATCCCC TCATTGGAAG GCTTCCATCT TCTAATCAAT CTGGAATTAG TGAAATAAGA GATGGAATAT ACTTATATAC TCATTTGTCA GCAGTAAATA TTTTAAAAGA ACTTAAACTA TTATTTAAAT TTTATAATAT TTCAGAAAAA GATTTCACTA TTTCCGTTAG AAAACAATAA
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Protein sequence | MKADTFNIIQ RLFDTSQMIL KIPVYQRNYD WTEGNVRRLL EDVENVIKNK QQYFIGAIVY MESDNNDLGM PEFLIIDGQQ RITTLTILLQ ALKDLCVQSD QQVLEMIDSL LTNKYSSDEY KIKLKPIKSD NIQYERLLNG NLDDMDYNGH IYKNYKIAKN IFSNWINNGI KPIEILLALK KLQVVGISLK SGEDDPQIIF ESINSTGVAL TNTDLIRNFL LMGDQDQDKL FEEYWLPIEN KLRKNNNNET LDLFFRQYVI TKSNSTITER KVYSSFINLF RVNNFTHESQ LKELNMYANI YATFLYPNNS NYNDKIKGYL LDLKQLKQST CYPFLMHVFK DYENKIIDEE TLSKVLSLIT IYLIRRSICN VPTNSLNTLF AYLYVRVFKV TNNKNKYYES INKYLFSQKN KDEIPNDENV KYALEHENLY QNKELCRLLM LDIENNDFKE KIDTDNLTIE HIMPQTLSNS WKQIISDEEH DKYVHTLGNL SITGYNSELS NKSFKEKKKL IKENSKIQIL NQDVINQDSW TINNIKKRAI RLSRILLNKY YLSRITDPSI EFELVDKLSL SDLQRIKGRK PVSFTLQGAN YTAKTFKQLL IEVVQLLDQD NPKILDSLIG FRFSERDISV QNPLIGRLPS SNQSGISEIR DGIYLYTHLS AVNILKELKL LFKFYNISEK DFTISVRKQ
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