Gene LGAS_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0903 
Symbol 
ID4439875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp899616 
End bp901685 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content26% 
IMG OID639672759 
Producthypothetical protein 
Protein accessionYP_814730 
Protein GI116629558 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00000406708 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCTG ATACCTTTAA TATCATTCAA AGATTATTTG ATACATCGCA AATGATATTA 
AAAATCCCTG TATATCAACG AAATTACGAT TGGACAGAAG GAAATGTTCG TAGATTATTA
GAAGATGTTG AAAATGTCAT CAAAAATAAG CAGCAATATT TTATAGGTGC CATTGTTTAT
ATGGAATCAG ACAATAATGA TTTGGGAATG CCGGAATTTC TAATTATTGA TGGGCAGCAA
CGCATTACGA CATTGACAAT ACTTTTACAA GCATTAAAAG ATCTATGTGT ACAGAGTGAT
CAGCAAGTTT TGGAAATGAT AGATTCTTTG CTAACAAATA AGTATTCATC AGATGAATAT
AAAATTAAAC TAAAACCAAT TAAGTCTGAC AATATTCAGT ATGAACGGCT ATTGAATGGT
AATTTAGATG ATATGGATTA TAATGGCCAT ATTTATAAAA ATTATAAAAT TGCAAAAAAT
ATATTCTCAA ATTGGATTAA TAATGGTATT AAACCAATTG AAATTCTTCT AGCATTAAAG
AAATTACAAG TAGTAGGAAT TAGTCTTAAA TCAGGAGAAG ATGATCCCCA AATTATTTTT
GAGAGTATCA ATTCTACAGG GGTTGCTCTA ACTAATACAG ATTTAATTAG AAATTTCCTT
TTAATGGGTG ATCAAGATCA AGATAAACTC TTTGAAGAAT ATTGGCTTCC AATTGAAAAT
AAATTAAGAA AAAATAATAA CAATGAAACT TTAGATTTGT TTTTCAGACA ATATGTTATT
ACCAAGTCCA ATTCAACTAT TACAGAAAGA AAAGTTTATT CATCTTTTAT AAATCTTTTT
AGAGTAAATA ATTTTACTCA TGAGTCTCAG TTAAAAGAAT TGAATATGTA TGCTAATATT
TATGCCACTT TTTTGTACCC GAATAATTCT AATTATAATG ATAAAATAAA AGGGTATTTG
CTAGATTTAA AACAACTTAA GCAATCTACA TGCTATCCAT TTTTAATGCA TGTATTTAAA
GATTATGAAA ATAAGATTAT TGATGAGGAA ACTTTATCTA AAGTTTTATC TTTAATTACA
ATTTACTTAA TAAGAAGATC AATTTGTAAT GTTCCAACTA ATTCCTTAAA TACTTTATTT
GCTTATCTTT ATGTTCGTGT GTTTAAGGTT ACTAATAATA AAAATAAATA TTATGAGTCA
ATTAATAAAT ATTTGTTTAG TCAAAAGAAT AAAGATGAAA TTCCAAATGA TGAAAATGTA
AAGTATGCAT TAGAACATGA AAATTTGTAT CAAAATAAAG AATTATGTAG ATTGTTAATG
CTGGATATTG AAAATAATGA CTTCAAAGAA AAAATTGATA CTGATAATTT GACTATTGAA
CATATCATGC CACAAACATT AAGTAATAGT TGGAAACAGA TTATTTCTGA CGAAGAACAT
GATAAATATG TTCATACATT AGGAAACTTG TCTATTACAG GATATAATTC AGAATTATCT
AATAAAAGCT TTAAAGAGAA AAAGAAATTA ATCAAGGAGA ATTCAAAAAT TCAAATTTTA
AATCAGGATG TGATAAATCA AGACAGTTGG ACCATAAATA ATATTAAGAA ACGTGCAATA
CGATTAAGTA GAATTCTCTT AAATAAGTAT TATTTATCGC GTATTACAGA TCCGTCTATT
GAATTTGAAT TAGTAGATAA GCTTTCATTA TCAGATCTTC AGAGAATTAA AGGTAGAAAG
CCTGTGTCAT TTACTTTACA AGGCGCAAAT TATACGGCCA AAACTTTTAA ACAATTATTA
ATAGAAGTAG TACAATTATT GGATCAAGAT AATCCTAAAA TTTTAGATAG TTTAATAGGT
TTTCGATTTA GTGAAAGAGA TATTTCTGTT CAAAATCCCC TCATTGGAAG GCTTCCATCT
TCTAATCAAT CTGGAATTAG TGAAATAAGA GATGGAATAT ACTTATATAC TCATTTGTCA
GCAGTAAATA TTTTAAAAGA ACTTAAACTA TTATTTAAAT TTTATAATAT TTCAGAAAAA
GATTTCACTA TTTCCGTTAG AAAACAATAA
 
Protein sequence
MKADTFNIIQ RLFDTSQMIL KIPVYQRNYD WTEGNVRRLL EDVENVIKNK QQYFIGAIVY 
MESDNNDLGM PEFLIIDGQQ RITTLTILLQ ALKDLCVQSD QQVLEMIDSL LTNKYSSDEY
KIKLKPIKSD NIQYERLLNG NLDDMDYNGH IYKNYKIAKN IFSNWINNGI KPIEILLALK
KLQVVGISLK SGEDDPQIIF ESINSTGVAL TNTDLIRNFL LMGDQDQDKL FEEYWLPIEN
KLRKNNNNET LDLFFRQYVI TKSNSTITER KVYSSFINLF RVNNFTHESQ LKELNMYANI
YATFLYPNNS NYNDKIKGYL LDLKQLKQST CYPFLMHVFK DYENKIIDEE TLSKVLSLIT
IYLIRRSICN VPTNSLNTLF AYLYVRVFKV TNNKNKYYES INKYLFSQKN KDEIPNDENV
KYALEHENLY QNKELCRLLM LDIENNDFKE KIDTDNLTIE HIMPQTLSNS WKQIISDEEH
DKYVHTLGNL SITGYNSELS NKSFKEKKKL IKENSKIQIL NQDVINQDSW TINNIKKRAI
RLSRILLNKY YLSRITDPSI EFELVDKLSL SDLQRIKGRK PVSFTLQGAN YTAKTFKQLL
IEVVQLLDQD NPKILDSLIG FRFSERDISV QNPLIGRLPS SNQSGISEIR DGIYLYTHLS
AVNILKELKL LFKFYNISEK DFTISVRKQ