| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0884 |
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| Symbol | |
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| ID | 4439891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 877294 |
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| End bp | 878202 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672740 |
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| Product | integrase |
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| Protein accession | YP_814711 |
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| Protein GI | 116629539 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.161871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000000000000894527 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCAGA CACAGACGAT GAAGGATAAT TTAGAAGATT ATTTACGTTT CAGTCAAGTG
GAACGTGGCT TAAGCCCTAA TACCATTATT TCTTATCGAA CTGATTTAGA AGAATATTTA
GATTATTTAC AAGATCAAAA TGAAACAAGC TGGGAAGTCG ATTATCTAGT TGTTGACGCT
TTTCTTGCTA CACAAAAAGA CAAGGGAAAG GCAACAACTT CAATTAGTCG GATGATCTCT
AGTTTGAGAA AGTTCTATCA ATGGCTCTTA AGACAGGATA TAATTGAACG TGATCCATTA
GTAAAAATTG ATTCCCCAAA AAGTGAACGG AGACTGCCAA CCGCTTTAAG CGAAGAAGAA
GTTGATAAAC TACTTGCGGC TCCTGATACG AATACACCAC TAGGAATTAG GGATCGTGCC
ATGCTAGAGG TACTTTATGC AACTGGGATG CGGGTTAGTG AATTAATAAA TTTACGAACT
GGTGATATTC ATGCCGATTT AAAAATCATT AGGGTTCTTG GCAAAGGCTC AAAAGAACGA
CTTGTACCAA TTACTGAAGT CGCTTTATCA TGGCTTGAGA AATATCAAAC AGATGTTAGG
GATGCCCAAG TATTAAAAAG TGGTCAATTT ACTGATGTAA TTTTCTTAAA TAATCATGGT
CATCAACTAA CTAGACAGGC TGTTTGGCAG AAAATAAAAA AGTATTGTCA GCTGATTGGA
ATAACTAAAA ATGTTACTCC TCATACTTTG AGACATACTT TTGCTACTCA TTTACTCGAA
AATGGGGCAG ATTTGCGTGT AGTTCAAGAA ATTTTGGGTC ATAGTGATAT TACAACTACG
CAGATCTATA CTAATCTGAC GCAGAAACAT ATTTTGGAGG TTTATAATCA AGCACATCCA
CGTGCTTAA
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| Protein sequence | MNQTQTMKDN LEDYLRFSQV ERGLSPNTII SYRTDLEEYL DYLQDQNETS WEVDYLVVDA
FLATQKDKGK ATTSISRMIS SLRKFYQWLL RQDIIERDPL VKIDSPKSER RLPTALSEEE
VDKLLAAPDT NTPLGIRDRA MLEVLYATGM RVSELINLRT GDIHADLKII RVLGKGSKER
LVPITEVALS WLEKYQTDVR DAQVLKSGQF TDVIFLNNHG HQLTRQAVWQ KIKKYCQLIG
ITKNVTPHTL RHTFATHLLE NGADLRVVQE ILGHSDITTT QIYTNLTQKH ILEVYNQAHP
RA
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