Gene LGAS_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0828 
Symbol 
ID4439973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp813886 
End bp815394 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content35% 
IMG OID639672685 
Productamino acid transporter 
Protein accessionYP_814657 
Protein GI116629485 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000137053 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG ACAAATCCGT CAAAATTGGA TTAAAAACTC TAGTTTTGAT GATCTTTTCA 
GCCATTTTTG GCTTTAGCAA TTCATTAACT GCCTATTATC AAATGGGGTA TGCAAGTATT
GTTTGGTATA TTATAACCGC AATTTTATTC TTTTTGCCTT CTGCACTTAT TTTTGCGGAA
TATGGAGCAG CTTTTAAGGG AGTTAAAGGT GGAATTTTTT CTTGGCTTAA AGGATCAGTT
AGTGAAAAAA CTGCATTTAT TGGTACTTTT ATTTGGCTAG CTGCGTGGGT TGTTTGGCTG
GTGTCATCGA CTCAATTTTT CTTGGTATCA GTGTCGACTG CAATTTCAGG TCATGATACA
ACGCAAAATT GGCATTTTTT AAACTTGTCA TCGACACAAT TATTGGGAAT TTTAGAAGTA
ATATTTTTAG TAGTAGTGAC TTTTTTTGCC GCTAAAGGTG TCGATAAAAT TGCTGCTGTA
AGTAATGTTG GTGGCTTTTT TACTTTAGCT ATTACAATTG GCTTTACTTT AGTATCTATT
TTAGTTTTCT TTTTGAATCA AGGACATCTA GCAGAACCGT TGACTGTGCA ATCATTAGTT
CATTCTCCTA ATCCGGCTTT CCAGTCTCCA ATTGCTGTGG TGTCATTCAT TGTTTATGCA
TTATTTGCTT ATGGCGGTTT AGAAACTTCA GCGGGAGTAA TTGATTCTGT TGATAAACCT
GAAAAGACTT TTCCTAAAGC TTTGATTACA GCTATGGTCT GGATGACAGC TTTATATGTC
TTGAATATTT TAATGTGTGG AGTTGCTGCA AATTGGAGTA GCGAATTAAG TGGCAAAAAT
GTTGATTTGG CCAATGTGGA ATATGTTTTA ATCAACAATT TGGGAGTAGA AACAGGAAAG
GCTTTTGGAC TTTCTCATTC AGCTTCCCTA ACACTGGGTG CTACATTTTC TCGTTTTGCC
GGATTAGCTG ATGTATTGGC TGGAATTTCA GCAGCATTTT TAATGGTTTA TTCACCTGTT
AAATCGTTTA TTGAAGGTTG TGATCCTAAA CTTTTACCTA AAAACTTGGT TAAATTGAAT
AAACATGGCA TGCCAGAACG TTCAATGTGG GTTCAGGCGG TGATTGTTAG TGTTATTATC
TTATTTATTT CTTTTGGTGG TAATGCAGCA GGTCAGTTTT ATACTATTTT GATGGATATG
ATGAATGTTT CATCGTCAGC ACCTTACTTA TTTTTGATTG GAGCTTATCC TTTCTTTAAG
ATGAAGCAAG GAATTGATCG TCCATTTGTA TTTATTGAGG GAAAGAAGCG TGTCTGGACG
GTAACAATTG TAGTTTGGCT TGTAGTTGCA ATTGGTATTA TCTTTACTTG TGTTGAGCCA
CTCTTTACTG GAGATTATGC AACATCCTTC TGGACTGCTA TTGGACCAGT AGCCTTTGGA
ATTATTGCTT GGGTATATTA TTCATATCAA GAAAGAAAAA GCATTACTGT AGTGGATGAA
GAAGAATAA
 
Protein sequence
MKKDKSVKIG LKTLVLMIFS AIFGFSNSLT AYYQMGYASI VWYIITAILF FLPSALIFAE 
YGAAFKGVKG GIFSWLKGSV SEKTAFIGTF IWLAAWVVWL VSSTQFFLVS VSTAISGHDT
TQNWHFLNLS STQLLGILEV IFLVVVTFFA AKGVDKIAAV SNVGGFFTLA ITIGFTLVSI
LVFFLNQGHL AEPLTVQSLV HSPNPAFQSP IAVVSFIVYA LFAYGGLETS AGVIDSVDKP
EKTFPKALIT AMVWMTALYV LNILMCGVAA NWSSELSGKN VDLANVEYVL INNLGVETGK
AFGLSHSASL TLGATFSRFA GLADVLAGIS AAFLMVYSPV KSFIEGCDPK LLPKNLVKLN
KHGMPERSMW VQAVIVSVII LFISFGGNAA GQFYTILMDM MNVSSSAPYL FLIGAYPFFK
MKQGIDRPFV FIEGKKRVWT VTIVVWLVVA IGIIFTCVEP LFTGDYATSF WTAIGPVAFG
IIAWVYYSYQ ERKSITVVDE EE