| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0801 |
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| Symbol | rpsB |
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| ID | 4440015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 781083 |
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| End bp | 781898 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639672658 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_814630 |
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| Protein GI | 116629458 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000778728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 8.51058e-18 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGAGGAA TTAACCAGGA GGAATTTTTT ATGACAGTTG TTACTATGAA GCAATTGCTT
GAAGCAGGTG TCCACTTTGG TCACCAAACT AGAAGATGGG ATCCAAAGAT GGCTCCTTAC
ATTTTCACTC AAAGAAACGG AATCTACATC ATTGACTTGC AAAAGACTAT CAGGATGTTA
GATGACGCTT ACAACTACGT TAAGGCAGTT GCTCAAGACG GCGGTGTATT CTTATTCGTT
GGTACTAAGA AGCAAGCACA GGACGCTGTT AAAGAAGAAG CTACACGTGC AGGTCAATAC
TATGTTAACC AACGTTGGTT AGGTGGTACT TTGACTAACT GGACTACTAT CCAAAGCCGT
GTTAAGAGAT TAAAGCAATT AAAAGAAATG TCAGAAGACG GCACTTTCGA TGTATTACCA
AAGAAGGAAG TTGCTCTTTT GACTAAGGAA ATGGAAAAAC TTGAAAGATT CTTAGGTGGT
ATCGAAGATA TGCCTAGAAT TCCAGATGTT ATGTTTGTTG TTGATCCTAA GAAAGAAAAG
ATCGCTGTTC ACGAAGCAAA CATTTTAGGT ATCCCTGTAG TAGCTATGGT TGATACTAAC
ACTGATCCAG ATCCAATCGA CGTTGTTATT CCTGCAAACG ACGATGCAAT TCGTGCAATT
CGTTTAATTT CAGGTGCTAT GGCTGACGCA ATTATCGAAG GTAAGCAAGG TCAAGATGAC
AGCGAAGACG TTGAAAAAGA AATGGCTGAC AAAGCTGCAG CTGAAAACGA TGACGAAGAA
TCTATCGAAG AAGTTGTAGA AAAATCAGAA GACTAA
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| Protein sequence | MRGINQEEFF MTVVTMKQLL EAGVHFGHQT RRWDPKMAPY IFTQRNGIYI IDLQKTIRML
DDAYNYVKAV AQDGGVFLFV GTKKQAQDAV KEEATRAGQY YVNQRWLGGT LTNWTTIQSR
VKRLKQLKEM SEDGTFDVLP KKEVALLTKE MEKLERFLGG IEDMPRIPDV MFVVDPKKEK
IAVHEANILG IPVVAMVDTN TDPDPIDVVI PANDDAIRAI RLISGAMADA IIEGKQGQDD
SEDVEKEMAD KAAAENDDEE SIEEVVEKSE D
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