Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0788 |
Symbol | trmD |
ID | 4440002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 769823 |
End bp | 770560 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672645 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_814617 |
Protein GI | 116629445 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000000375305 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 2.92614e-28 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | TTGAGGGATT ACGAGATGAA AATTAATGTT TTAACCCTAT TCCCAGATAT GTTTACGCCT TTGCAAGTAT CAATGTTAGG AAGAGGATTA GAAGATAAAA AATGGGAGTT AAATTTAGTT AATTTCCGCA ATTTTACTAC AGATGTCCAC CATCATGTTG ATGACACTCC ATATGGAGGA GGGGCTGGCA TGGTGTTACA AATTATGCCG ATAAAAAAAG CATTGGATTC TTTAACTAAT AAAGGAAAAG TAATTATTAC AGCTCCTCAA GGAAAGACTT TTAATGAAAA GATGGCGCAA GATTGGTCTA AAGAAGAAAA TCTAACATTT ATTTGTGGCC ACTATGAGGG ATTTGATCAA AGAGTATATG ACTTAGCTGA TGAAACAGTT TCGATTGGTG ATTATGTCCT TACTGGAGGC GAGTTACCAA CGATGAGTAT GATTGATGCA ACTGTACGTT TATTGCCTGG GATTTTAGGA AATGCTGCTT CCCCAGTTGA AGAAAGTTTT TCTCATGGAC TTTTAGAATA TCCTCAATAT ACTCGTCCGG CTGATTTTGA AGGGCAAAAG GTGCCTGAAG TGTTAACATC TGGAAATCAT CAAAAAATTG CTGAATGGCG CCATAAAGAA GCATTACGTG CAACCTATCT TCATCGTCCA GATATGTTAG CTGAACGAAT ACTAACAGAT GAAGAAAAGA AGATGCTTGA AGAAATTAAA CTTGAAAAAG AGAATTAG
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Protein sequence | MRDYEMKINV LTLFPDMFTP LQVSMLGRGL EDKKWELNLV NFRNFTTDVH HHVDDTPYGG GAGMVLQIMP IKKALDSLTN KGKVIITAPQ GKTFNEKMAQ DWSKEENLTF ICGHYEGFDQ RVYDLADETV SIGDYVLTGG ELPTMSMIDA TVRLLPGILG NAASPVEESF SHGLLEYPQY TRPADFEGQK VPEVLTSGNH QKIAEWRHKE ALRATYLHRP DMLAERILTD EEKKMLEEIK LEKEN
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