Gene LGAS_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0748 
Symbol 
ID4440067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp727673 
End bp728242 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content34% 
IMG OID639672605 
Productelongation factor P 
Protein accessionYP_814577 
Protein GI116629405 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.305929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.000261541 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAATGA TCTCAGTTAA TGAATTTAAA AATGGATTAA CTATTGAATA TAACAACGAT 
TTATGGCGTA TTGTTGAATT CCAACACGTT AAGCCAGGTA AAGGTAGTGC CTTTGTTCGT
TCAAAGCTTA AGAGTTTAAG AACTGGTGCA GTACAAGAAT ATACTTTCCG TTCAACTGCT
AAGGTTAATA CTGCTGATAT TCAAACCAAA GCTATGCAAT ACTTATACAA CGATGGTACA
AGTTTTGTAT TTATGGATAC TACTACTTAT GAACAACTTG AAATTCCAGA AGCTCAAGTT
GAAAGAGAAT CTAAGTTCTT AAAAGAAAAC ATGGTAGTTA ATGTCATTAT GCACGATGGT
GAAACTTTAG GTGTTGACTT ACCTAACACG GTTGACCTTG AAGTTGCTGA AACTGAACCT
AACATTAAAG GTGATACTTC CTCTGGTGGT GGTAAGCCTG CAACTATGGA AACAGGTTTA
GTAGTTAATG TACCATTCTT TATTAATCAA GGTGATGTAT TAACTATTAA TACTGCTGAT
GGTACTTACG TTTCTCGTGC AAATAAATAA
 
Protein sequence
MTMISVNEFK NGLTIEYNND LWRIVEFQHV KPGKGSAFVR SKLKSLRTGA VQEYTFRSTA 
KVNTADIQTK AMQYLYNDGT SFVFMDTTTY EQLEIPEAQV ERESKFLKEN MVVNVIMHDG
ETLGVDLPNT VDLEVAETEP NIKGDTSSGG GKPATMETGL VVNVPFFINQ GDVLTINTAD
GTYVSRANK