Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0745 |
Symbol | |
ID | 4440064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 725629 |
End bp | 726099 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639672602 |
Product | ribosomal protein L21 |
Protein accession | YP_814574 |
Protein GI | 116629402 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0261] Ribosomal protein L21 |
TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000031212 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.00014666 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGATATTGA ATTGCTTTAA AAGAGGGATG AGAGTATACT GTAAGAGTTG TATTTGTGGA AACCTCACAT CTGCAACCGC ACGTTTATGG GGTAAGAAGA GAATTAACGT TAATTCCACC TCATACGGCG AGTCTAAGTA TTTTTTCGGA GGTGTACAAA TGTACGCAGT TATTAAAACC GGTGGTAAGC AATACAAGGT TGCTAAGGGC GACAGCGTTT TTGTTGAAAA ACTTGAAGTT AAGCCTGGCG ACGAAGTAAC TTTTGATGAA GTTATTCTTG TAAATGATGG TAAGTCAACT AAAATTGGTA CTCCAGTAGT TGAAGGTGCT AAAGTTGTTG CTAAAGTTGA AAAGCAAGGC AAAGAAAAGA AAGTTGTTAC TTTCAAATAC AAGCCTAAGA AGCACTCACA CACTAAGTAC GGTCACCGTC AACCTTACAC TAAGGTAACT ATCGAAAGCA TTGAAGCTTA A
|
Protein sequence | MILNCFKRGM RVYCKSCICG NLTSATARLW GKKRINVNST SYGESKYFFG GVQMYAVIKT GGKQYKVAKG DSVFVEKLEV KPGDEVTFDE VILVNDGKST KIGTPVVEGA KVVAKVEKQG KEKKVVTFKY KPKKHSHTKY GHRQPYTKVT IESIEA
|
| |