Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0725 |
Symbol | |
ID | 4440078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 707629 |
End bp | 709101 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672582 |
Product | major facilitator superfamily permease |
Protein accession | YP_814554 |
Protein GI | 116629382 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.29773 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAC AACCAACCGA TATTCACGGA AAAGCCTATA ATCGAAACTT GCTTGTTTTA GTTTTAATTA TTGGATCTTT CTGTACTGTT TTAAACGGGA CCTTGCTTGC AACAGCTCTT CCTTCAATTA TGCGTTCCTT TCATATCAGT ACTGCCACTG CTGAATGGCT TTCAACTGCA TTTTTGTTAG TTAATGGGGT TATGATTCCA GTCTCAGCTT GGTTAATTAA TCGTTTTGGC TCAAGGAAAA TGTATTTGAC AGCAATGTCT GTTTTCTTTA TCGGGACAGT GACAGCTGCA CTTGCGCCAA ATTTCGGCAC TTTATTAACT GGAAGAATTA TTCAAGGGTT GGGTGTTGGT GTTACTATGC CATTGCTTCA AACCATCATG CTTTCAATCT TTCCCGCTAA TAAGCGCGGC GCTGCGATGG GAACAGTTGG GATTGTTATT GGCCTCGCAC CAGCTATTGG TCCAACCTTA TCTGGCTGGA TTGTTGATAA TCTTTCTTGG CGCTACTTAT TCAGTATTAT TGCTCCAATT GCTGGAATAG TTATTATTTT AGCTTTTTTC TTAATTAAAG ACGTTCTTCC AACTAAGAAA GAAAAAATTG ATGTTTGGTC AGTGACAACT TCAACTGTGG GTTTTGGTAG TTTACTTTAT GGTTTTTCAG AAGCTGGTAA TAAAGGATGG ACTAACCCCG AAATTTTAGG ATTTATTGGC GTAGGAATTG TATTTGTTAT TCTTTTTGGT ATTCGCCAAT TAAAAATGGC AGATCCATTT TTGGATATCA CTGTCTTCAA ACATTTCGAA TTTTCTTTAG CAGCTGCTTT AAGTGGTATT ACCAATTTAG CAATGGTGGG TATTGAAATG GTATTACCAT TATATATTCA AAACCTACGT GGTGTGTCGG CATTTCACTC AGGATTGATA CTATTACCTG GTGCCTTAAT GATCGGAATC ATGTCACCAA TTACGGGGCG TTTATTCGAT AAATATGGTG CACGAAAAAT GGCAATTACT GGAATGACTC TTTTAACGCT TGGTACTATT CCATTTGTAT TCTTAACTGC AGAAAGCTCA TATACTATGA TTATTGTTTT ATACGCAATT AGAATGGTTG GTGTCGCTTT AGTTATGATG AATGTTACCA CTTCAGGAAT GAACTCATTG CCTTTAAATA AAATCGCTCA CGGAACAGCA GTAAATAATA CGTTCAGACA GGTCTTAAGT TCTATTGGTA CAGCTATCTT AGTTTCAATT TTAACCACTA CAACTAACAA TAATATGCCA AACAAAGATT TACTCCATAC TTTGCCACTT CAATATAAAA ATCAGGCAAT TAATGCCACT CTAGACGGAT TCCGTGCTTC ATTTGCAATG AGTATTCTTT TTGCCTTAGT TGCTTTAGTT CTTGCTTTCT TCTTAAAAAA GGGCAACCGC GCACGTGAAA ACCAAGAAGA GGTGAATGGA TAA
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Protein sequence | MDQQPTDIHG KAYNRNLLVL VLIIGSFCTV LNGTLLATAL PSIMRSFHIS TATAEWLSTA FLLVNGVMIP VSAWLINRFG SRKMYLTAMS VFFIGTVTAA LAPNFGTLLT GRIIQGLGVG VTMPLLQTIM LSIFPANKRG AAMGTVGIVI GLAPAIGPTL SGWIVDNLSW RYLFSIIAPI AGIVIILAFF LIKDVLPTKK EKIDVWSVTT STVGFGSLLY GFSEAGNKGW TNPEILGFIG VGIVFVILFG IRQLKMADPF LDITVFKHFE FSLAAALSGI TNLAMVGIEM VLPLYIQNLR GVSAFHSGLI LLPGALMIGI MSPITGRLFD KYGARKMAIT GMTLLTLGTI PFVFLTAESS YTMIIVLYAI RMVGVALVMM NVTTSGMNSL PLNKIAHGTA VNNTFRQVLS SIGTAILVSI LTTTTNNNMP NKDLLHTLPL QYKNQAINAT LDGFRASFAM SILFALVALV LAFFLKKGNR ARENQEEVNG
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