Gene LGAS_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0716 
Symbol 
ID4440103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp700026 
End bp700796 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content35% 
IMG OID639672573 
ProductHAD family phosphatase 
Protein accessionYP_814546 
Protein GI116629374 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAAAAA CAATCTTTTT TGATGTTGAC GGAACATTAG TTTCACATAA AACAGATAGT 
GTGCCTAAAA GTACTAGAGA GGCACTTGAA CTTTTACGTA AAAATGGCAT CAAACTAGTG
TTAGCTACTG GGCGTGATAT GAGCCAACTA AAGAAATTAC CGGTTAAAGA TATAAAATTT
GATGGTTATT TGACGATGAA TGGACAACTT TGTCTAGATG AAAATGATAA TGAACTTTTT
GGTAATCCTA TTAATGAACA AGATACTAAA AAATTGGTTA AACTAATTAA AGAGAAGACT
GTCCCGATTA CTACTATCGG TAAAGAAGGA CCGTACATTA ATTTTGTAAC AGATCAAGTA
GTTGCTGCTC AAAAGGCTGT TTCTAGTAAA GTTGCGCCAG TTGGTAAATA TCATGGTGAA
AATGTCTATC AATTTATTAC ATATGGAAAC CGTGATGACT TGAGAAAATT GGTTGATGAT
CTTCCAAACT GTAAATTAAG TTGGTGGAAT GAGTATGCAG TAGATATTAT TTCAAAAGAT
GGTGGTAAAC TAGCGGGTGT TGAGAAGTAT CTTAAATTGC AGGGTCAAAC TTTAGCAGAT
GCCATGGCTT TTGGCGATGG TGAAAATGAT TTAGAGATGC TTAAAGCTGT TCAAACGGGT
GTTGCTATGG GTAACGGGGA AGAACAAGTG AAGCAGATTG CTGATTATGT GACCAGTGAT
ATTAATGAGG ATGGAATCTA TAATGCCTGC AAGCACTATA AGTTGATTTA A
 
Protein sequence
MIKTIFFDVD GTLVSHKTDS VPKSTREALE LLRKNGIKLV LATGRDMSQL KKLPVKDIKF 
DGYLTMNGQL CLDENDNELF GNPINEQDTK KLVKLIKEKT VPITTIGKEG PYINFVTDQV
VAAQKAVSSK VAPVGKYHGE NVYQFITYGN RDDLRKLVDD LPNCKLSWWN EYAVDIISKD
GGKLAGVEKY LKLQGQTLAD AMAFGDGEND LEMLKAVQTG VAMGNGEEQV KQIADYVTSD
INEDGIYNAC KHYKLI