Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0716 |
Symbol | |
ID | 4440103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 700026 |
End bp | 700796 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639672573 |
Product | HAD family phosphatase |
Protein accession | YP_814546 |
Protein GI | 116629374 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAAAAA CAATCTTTTT TGATGTTGAC GGAACATTAG TTTCACATAA AACAGATAGT GTGCCTAAAA GTACTAGAGA GGCACTTGAA CTTTTACGTA AAAATGGCAT CAAACTAGTG TTAGCTACTG GGCGTGATAT GAGCCAACTA AAGAAATTAC CGGTTAAAGA TATAAAATTT GATGGTTATT TGACGATGAA TGGACAACTT TGTCTAGATG AAAATGATAA TGAACTTTTT GGTAATCCTA TTAATGAACA AGATACTAAA AAATTGGTTA AACTAATTAA AGAGAAGACT GTCCCGATTA CTACTATCGG TAAAGAAGGA CCGTACATTA ATTTTGTAAC AGATCAAGTA GTTGCTGCTC AAAAGGCTGT TTCTAGTAAA GTTGCGCCAG TTGGTAAATA TCATGGTGAA AATGTCTATC AATTTATTAC ATATGGAAAC CGTGATGACT TGAGAAAATT GGTTGATGAT CTTCCAAACT GTAAATTAAG TTGGTGGAAT GAGTATGCAG TAGATATTAT TTCAAAAGAT GGTGGTAAAC TAGCGGGTGT TGAGAAGTAT CTTAAATTGC AGGGTCAAAC TTTAGCAGAT GCCATGGCTT TTGGCGATGG TGAAAATGAT TTAGAGATGC TTAAAGCTGT TCAAACGGGT GTTGCTATGG GTAACGGGGA AGAACAAGTG AAGCAGATTG CTGATTATGT GACCAGTGAT ATTAATGAGG ATGGAATCTA TAATGCCTGC AAGCACTATA AGTTGATTTA A
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Protein sequence | MIKTIFFDVD GTLVSHKTDS VPKSTREALE LLRKNGIKLV LATGRDMSQL KKLPVKDIKF DGYLTMNGQL CLDENDNELF GNPINEQDTK KLVKLIKEKT VPITTIGKEG PYINFVTDQV VAAQKAVSSK VAPVGKYHGE NVYQFITYGN RDDLRKLVDD LPNCKLSWWN EYAVDIISKD GGKLAGVEKY LKLQGQTLAD AMAFGDGEND LEMLKAVQTG VAMGNGEEQV KQIADYVTSD INEDGIYNAC KHYKLI
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