Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0668 |
Symbol | |
ID | 4440125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 658563 |
End bp | 659975 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672525 |
Product | Phage portal protein, SPP1 Gp6-like |
Protein accession | YP_814498 |
Protein GI | 116629326 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01538] phage portal protein, SPP1 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0061406 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 184 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGAATTAG ATGCTTTAAA AAAGTTAATT CAAAATACTT CAACAAGTAG AAATGATCTA ATTAATAATT ACAAACAAGC AGTGAATTAT TATGAAAATA AGACTGATAT CACTACCAGA AACAACGGTA AAGCTAAGCT TAATAAGGAA GGTAAAAAAG ATCCTTTAAG AAGTGCTGAT AATCGCATTC CATCAAACTT TTATCAGTTG TTAGTAGACC AAGAAGCAGG TTACGTTGCT TCTGTTTTTC CTGACATTGA CGTTGGAAAA GATGCCGATA ATAAGAAAAT TATTGATGTC TTAGGCGATG ATCGTGCGTT GACGCTTAAC GGCTTATTAG TAGACAGTTC GAATGCTGGT CGAGCTTGGT TGCACTACTG GATTGATGAA GATAACAATT TCAGATATGG CATTATTCAA CCTGACCAGA TCACACCAAT TTATGCGACA ACGCTAGATA ATAAGCTGCT GGGTATTCTG AGAAGCTATA AACAGTTAGA TCCTGATAGT GGTAAGTACT TTACAGTTCA CGAATACTGG ACGGATAAAG AAGCACAATT CTTCAGGACA AGCGCAACCG ATAGCACAGT GATTGAGCCT TACAATATCA TTACTTCTTA CGATCTAAGC GCTGGCTATG AAACAGGACA GTCAAACACC TTAAAACACA ACTTTGGACG AGTTCCTTTT ATTGAATTTC CTAAAAATAA ATATCGCTTG CCTGAACTTA ACAAGTATAA GGGGTTAATT GATGCTTACG ATGACATCTA CAATGGATTT ATTAATGACT TAGACGATGT CCAAACTGTA ATTCTCGTCT TAACCAACTA TGGTGGTGCT AGCTTAGAGC AGTTCATGAA CGATCTAAGA GAATATAAGT CTATTAAGAT CAATAACGCA GGTAATGGCG ATAAGAGTGG CGTTGATAAG CTCCAAATTG ATATCCCTGT TGAAGCCCGT GACGATGCAC TTAAGATAAC CCGTGATAAC ATTTTCTTGT TTGGTCAAGG AATTGATCCA GCTAACTTTG AGAGTTCAAA TGCTTCTGGT GTAGCAATCA AAATGCTATA TTCTCACTTA GAATTAAAGG CTGCTAAAAC ACAAACTTAC TTTGAACATG CTATTAATGA GTTGGTTCGT GCAATTATGC GTTACCTTAA CTTTTCAGAT GCGGACAAGC GCCATATATC GCAACATTGG ACGAGAACTA AGGTAGAAGA TAGCTTAACT AAGGCTCAAA TTGTTTCTAC AGTAGCCAAT TACAGTTCAA AAGAAGCAGT TGCTAAAGCT AATCCTATTG TTGATGATTG GCAGCAAGAA CTGAAAGACT TAGCCAAGGA TAGAGAAGAA AATGATCCAT ATTCTAAACA AGCTGACGAG TTAAACGGTA AAGGCGTAGA CGATGAAGAG TAG
|
Protein sequence | MELDALKKLI QNTSTSRNDL INNYKQAVNY YENKTDITTR NNGKAKLNKE GKKDPLRSAD NRIPSNFYQL LVDQEAGYVA SVFPDIDVGK DADNKKIIDV LGDDRALTLN GLLVDSSNAG RAWLHYWIDE DNNFRYGIIQ PDQITPIYAT TLDNKLLGIL RSYKQLDPDS GKYFTVHEYW TDKEAQFFRT SATDSTVIEP YNIITSYDLS AGYETGQSNT LKHNFGRVPF IEFPKNKYRL PELNKYKGLI DAYDDIYNGF INDLDDVQTV ILVLTNYGGA SLEQFMNDLR EYKSIKINNA GNGDKSGVDK LQIDIPVEAR DDALKITRDN IFLFGQGIDP ANFESSNASG VAIKMLYSHL ELKAAKTQTY FEHAINELVR AIMRYLNFSD ADKRHISQHW TRTKVEDSLT KAQIVSTVAN YSSKEAVAKA NPIVDDWQQE LKDLAKDREE NDPYSKQADE LNGKGVDDEE
|
| |