Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0603 |
Symbol | |
ID | 4440195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 615919 |
End bp | 616440 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672460 |
Product | Phage terminase, small subunit |
Protein accession | YP_814435 |
Protein GI | 116629263 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3728] Phage terminase, small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00383652 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAACGGA AGTTAACAAC TAAACAAAAA ATATTTTGTG ATGAGTATAT AAAGTCTGGG AATGCTAAAG AGGCAGCCAT TAAAGCGGGA TATTCTCCAA AAACTGCTAA ATCAATTGGT CAGGAAAACC TGACTAAACC TGACCTGAAA GCTTATATTG ACGCTAAAAT GGCTGAAATT GAGTCACATA AGATCGCTGA TGCTAAAGAA GTGTTGGAAT TTTATACTAA AGTACTCCGA GATGAAGTTG TTGAAGAAGT TCCAATGTCT ACTGCTGATG ATGTGGTTGT AATCAAAAAG AAGCCTTCTT TCAAGGACAA AATTACAGCT TCAAAAGAAA TTATGAAGCG CTATCCATTA GTCGATCCTA TTGAGAAACA AAAACTTCAA AAACTTATTG CAGATACTCG TATATCGGAA GCAAAGGCTA CAGTTGCTGA ACGATTAGGC AATGAAAGTG ATGACAAGCT TGATGAACTT ATGGATAAGT TGATAAAAGC AAGTGAAAAG TCCCAAGAAT GA
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Protein sequence | MERKLTTKQK IFCDEYIKSG NAKEAAIKAG YSPKTAKSIG QENLTKPDLK AYIDAKMAEI ESHKIADAKE VLEFYTKVLR DEVVEEVPMS TADDVVVIKK KPSFKDKITA SKEIMKRYPL VDPIEKQKLQ KLIADTRISE AKATVAERLG NESDDKLDEL MDKLIKASEK SQE
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