Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0585 |
Symbol | |
ID | 4439054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 608155 |
End bp | 608955 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672442 |
Product | hypothetical protein |
Protein accession | YP_814419 |
Protein GI | 116629247 |
COG category | [K] Transcription |
COG ID | [COG3561] Phage anti-repressor protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000374128 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGACGA TGAAGATGAA TAACGAATTA ATCAAAGTAA CGGTCAAGAA TGACCAGCAA CTAGTTAGTG CTAGAGATTT ATATAAGGGA TTAGGTATCA AGCGAAGATT TTCCGCTTGG TGGGAACAGA ACAGCAATGA CTTTAAAGAA AATAGTGATT TCCAACGTGT ACTTATAAGT ACACCTAGAG AAAACCGCGG TAGCATTGAG CTTCAGGACT ATGCACTCAC AATTGATATG GCTAAGCAGC TGTGTCTTTT GAGCCGTACC TCAAAGGGCA AGGAATATCG AGAATACTTA ATCGAAGTTG AAAAGAAGTG GAATAATCCG GACATGATTA TGCAACGCGC CTTAACTATC GCTAACAATC GGGTGAAGTT GCTGGAAACT GAAAAGAGAG AACTAAAAGA AACAAATGCT AGACAAGCAG CTAAGATTGC TAAAGATGCT GACGATGTGG TTTTTGCCAA GGCTATTAGA TATAGCCATC ATGCAATCCC TGTTGGCGAA TTAGCTGAAA TTTTAACTCA AAACGGTTTT GTGATTGGAA GAAATCAACT ATTCCAATTA CTTAGAGAAG AAAAATATCT TTCAAGTTTT AATCATAGCT GGAACGTGCC AATGACACAG ATGGTTAAAA GAGGTCTGTT TAGAATTACA CATAATTTGA CCAGAGATGG CAGAGGATAT TCTCAAACAT GGGTAACACC TAAAGGTCAG AAATACATTA TTAACAAAGC GCTAAGAGGA AAATTTGATG ATATTTATCA AAAAGTTATG GTATCAACCT TGAACGTTTA G
|
Protein sequence | MRTMKMNNEL IKVTVKNDQQ LVSARDLYKG LGIKRRFSAW WEQNSNDFKE NSDFQRVLIS TPRENRGSIE LQDYALTIDM AKQLCLLSRT SKGKEYREYL IEVEKKWNNP DMIMQRALTI ANNRVKLLET EKRELKETNA RQAAKIAKDA DDVVFAKAIR YSHHAIPVGE LAEILTQNGF VIGRNQLFQL LREEKYLSSF NHSWNVPMTQ MVKRGLFRIT HNLTRDGRGY SQTWVTPKGQ KYIINKALRG KFDDIYQKVM VSTLNV
|
| |