Gene LGAS_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0514 
Symbol 
ID4440259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp541289 
End bp541783 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content32% 
IMG OID639672372 
Productphosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
Protein accessionYP_814350 
Protein GI116629178 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000254817 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTA CGTTAGCAAG AATTGATCAA AGACTTATTC ATGGAATTAC TGTTAATCAG 
TGGAATAAGG TTCTTCATCC AAAAAGATTT ATGGTTATTG ATGATGAGGT TAGCCAAAAC
GAAATGGTAA AGGCAAGTAT GAGAATGAGT AAGCCAACAG GAACCGGCAT GTCTATCATT
AATGAAGAAA AAGCAATAAC TAATTTTAAA AATGGAAAAT ATGATTCTCA TTCTGTTTTC
TTAATTGTTA AAGAACCACA TTATATTTTG GATTTAATCA ATGCTGGAAT AGAAATCCCG
AAAGTTAATG TAGGAGCTTT ATTTGAAGAA GGAGATAGAA AACCTTACAC CAAGCGAGTA
GCTTTAGATG AAAAAGAACT AGCTGATTTA AAGGCAATTG CCGATAAAGG TATTCCAGTA
TTTTTCGAAT ATACTCCAGA TGATGAAAAT GAGGTTTCAC TTGCAGAAGT ACTAAAAAAT
AAAGGAGAGA ATTAA
 
Protein sequence
MPITLARIDQ RLIHGITVNQ WNKVLHPKRF MVIDDEVSQN EMVKASMRMS KPTGTGMSII 
NEEKAITNFK NGKYDSHSVF LIVKEPHYIL DLINAGIEIP KVNVGALFEE GDRKPYTKRV
ALDEKELADL KAIADKGIPV FFEYTPDDEN EVSLAEVLKN KGEN